Structure of PDB 8jrj Chain B

Receptor sequence

>8jrjB (length=177) Species: 29078 (Eptesicus fuscus) [Search protein sequence]

PAHFLYQVKFECQFSNGTERVRYLHRSIYNGQEDVRFDSDVGEFRALTEL
GRPRAEYWNSQKDYLEDERASVDTYCRHNYGVLDGFLVHRQTAPTVTVFP
AKNLLVCSVNGFYPGPIEVRWLRDEQAGVVSTGLIRNGDWTFQMLVMLET
VPRSGEVYTCHVQHPSSSSPVTVEWRA

3D structure

PDB

8jrj Crystal structure of the bat MHC II molecule at 2.8 A resolution

Chain

Resolution

2.5 Å

3D
structure

[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	peptide	B	H61 R90 W94 Y100 E104 S107 Y111 H114 N115 V118 L119	H25 R54 W58 Y64 E68 S71 Y75 H78 N79 V82 L83

External links

PDB	RCSB:8jrj, PDBe:8jrj, PDBj:8jrj
PDBsum	8jrj
PubMed

[Back to BioLiP]