Structure of PDB 8jl3 Chain B

Receptor sequence
>8jl3B (length=527) Species: 9606 (Homo sapiens) [Search protein sequence]
AELKMDQALLLIHNELLWTNLTVYWKSECCYHCLFQVLVNVPQSPKAGKP
SAAAASVSTQHGSILQLNDTLEEKEVCRLEYRFGEFGNYSLLVKNIEIAC
DLAVNEDPVDSNLPVSIAFLIGLAVIIVISFLRLLLPRLRSVDTFRGIAL
ILMVFVNYGGGKYWYFKHASWNGLTVADLVFPWFVFIMGSSIFLSMTSIL
QRGCSKFRLLGKIAWRSFLLICIGIIIVNPNYCLGPLSWDKVRIPGVLQR
LGVTYFVVAVLELLFAKPVPECLSLRDITSSWPQWLLILVLEGLWLGLTF
LLPVPGCPTGYLGPGGIGDFGKYPNCTGGAAGYIDRLLLGDDHLYQHPSS
AVLYHTEVAYDPEGILGTINSIVMAFLGVQAGKILLYYKARTKDILIRFT
AWCCILGLISVALTKVSENEGFIPVNKNLWSLSYVTTLSSFAFFILLVLY
PVVDVKGLWTGTPFFYPGMNSILVYVGHEVFENYFPFQWKLKDNQSHKEH
LTQNIVATALWVLIAYILYRKKIFWKI
3D structure
PDB8jl3 membrane proteins
ChainB
Resolution2.59 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 2.3.1.78: heparan-alpha-glucosaminide N-acetyltransferase.
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 ACO B R267 L268 V271 D272 R275 M282 F313 M317 S320 S324 K341 R345 V376 L380 S607 Y611 K662 R138 L139 V142 D143 R146 M153 F184 M188 S191 S195 K212 R216 V247 L251 S471 Y475 K526
BS02 CLR B G429 L437 G293 L301
Gene Ontology
Molecular Function
GO:0015019 heparan-alpha-glucosaminide N-acetyltransferase activity
GO:0016746 acyltransferase activity
Biological Process
GO:0007041 lysosomal transport
GO:0030200 heparan sulfate proteoglycan catabolic process
GO:0051259 protein complex oligomerization
Cellular Component
GO:0005764 lysosome
GO:0005765 lysosomal membrane
GO:0005886 plasma membrane
GO:0016020 membrane
GO:0035579 specific granule membrane
GO:0043202 lysosomal lumen
GO:0070821 tertiary granule membrane

View graph for
Molecular Function

View graph for
Biological Process

View graph for
Cellular Component
External links
PDB RCSB:8jl3, PDBe:8jl3, PDBj:8jl3
PDBsum8jl3
PubMed
UniProtQ68CP4|HGNAT_HUMAN Heparan-alpha-glucosaminide N-acetyltransferase (Gene Name=HGSNAT)

[Back to BioLiP]