Structure of PDB 8j92 Chain B

Receptor sequence
>8j92B (length=83) Species: 3702 (Arabidopsis thaliana) [Search protein sequence]
KVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDA
VTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
3D structure
PDB8j92 Molecular and structural basis of the chromatin remodeling activity by Arabidopsis DDM1.
ChainB
Resolution2.9 Å
3D
structure
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Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna B R35 R45 I46 G48 K79 T80 R16 R26 I27 G29 K60 T61
BS02 dna B P32 R36 P13 R17
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0005515 protein binding
Biological Process
GO:0009414 response to water deprivation
Cellular Component
GO:0000325 plant-type vacuole
GO:0000786 nucleosome
GO:0005576 extracellular region
GO:0005634 nucleus
GO:0005694 chromosome
GO:0005730 nucleolus
GO:0005777 peroxisome
GO:0005794 Golgi apparatus
GO:0005829 cytosol
GO:0005886 plasma membrane
GO:0009506 plasmodesma
GO:0009507 chloroplast
GO:0009536 plastid
GO:0009579 thylakoid

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8j92, PDBe:8j92, PDBj:8j92
PDBsum8j92
PubMed38992002
UniProtP59259|H4_ARATH Histone H4 (Gene Name=At1g07660)

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