Structure of PDB 8j72 Chain B

Receptor sequence
>8j72B (length=277) Species: 10090 (Mus musculus) [Search protein sequence]
PGLSFGSEGDGEGKLCRPWGVSVDKEGFIIVADRSNNRIQVFKPCGSFHH
KFGTLGSRPGQFDRPAGVACDASRRIIVADKDNHRIQIFTFEGQFLLKFG
EKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRIQLFGPDGVFLNKYGFEG
SLWKHFDSPRGVAFNNEGHLVVTDFNNHRLLVIHPDCQSARFLGSEGSGN
GQFLRPQGVAVDQEGRIIVADSRNHRVQMFEANGSFLCKFGAQGSGFGQM
DRPSGIAVTPDGLIVVVDFGNNRILIF
3D structure
PDB8j72 Molecular mechanism governing RNA-binding property of mammalian TRIM71 protein.
ChainB
Resolution3.16 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 2.3.2.27: RING-type E3 ubiquitin transferase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna B R612 R642 K659 D660 Y689 W691 R738 F753 R783 R801 R34 R64 K81 D82 Y111 W113 R160 F175 R205 R223
External links
PDB RCSB:8j72, PDBe:8j72, PDBj:8j72
PDBsum8j72
PubMed38036331
UniProtQ1PSW8|LIN41_MOUSE E3 ubiquitin-protein ligase TRIM71 (Gene Name=Trim71)

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