Structure of PDB 8j3t Chain B

Receptor sequence
>8j3tB (length=201) Species: 10359 (Human betaherpesvirus 5) [Search protein sequence]
TPVYVGGFLARYDQSPDERDVVEHWLHALPLNINHDDTAVVGHVAAMQSV
RDGLFCLGCVTSPRFLEIVRRASEKSELVSRGPVSPLQPDKVVEFLSGSY
AGLSLSTPFKHVALCSVGRRRGTLAVYGRDPEWVTQRFPDLTAADRDGLR
AQWQSGDPFRSDSYGLLGNSVDALYIRERLPKLRYDKQLVGVTERESYVK
A
3D structure
PDB8j3t Peptide-to-Small Molecule: Discovery of Non-Covalent, Active-Site Inhibitors of beta-Herpesvirus Proteases
ChainB
Resolution2.9 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.4.21.97: assemblin.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 T1F B N62 H63 S132 S134 C161 G164 R165 D227 I231 N34 H35 S104 S106 C115 G118 R119 D172 I176
Gene Ontology
Molecular Function
GO:0004252 serine-type endopeptidase activity
Biological Process
GO:0006508 proteolysis

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Molecular Function
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Biological Process
External links
PDB RCSB:8j3t, PDBe:8j3t, PDBj:8j3t
PDBsum8j3t
PubMed37974946
UniProtP16753|SCAF_HCMVA Capsid scaffolding protein (Gene Name=UL80)

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