Structure of PDB 8ilg Chain B

Receptor sequence
>8ilgB (length=176) Species: 10498 (African swine fever virus BA71V) [Search protein sequence]
GGMLTLIQGKKIVNHLRSRLAFEYNGQLIKILSKNIVAVGSLRREEKMLN
DVDLLIIVPEKKLLKHVLPNIRIKGLSFSVKVCGERKCVLFIEWEKKTYQ
LDLFTALAEEKPYAIFHFTGPVSYLIRIRAALKKKNYKLNQYGLFKNQTL
VPLKITTEKELIKELGFTYRIPKKRL
3D structure
PDB8ilg Structural Insight into Polymerase Mechanism via a Chiral Center Generated with a Single Selenium Atom.
ChainB
Resolution1.805 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 2.7.7.7: DNA-directed DNA polymerase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna B D51 K85 H115 F116 T117 G118 V120 R127 D53 K87 H117 F118 T119 G120 V122 R129
BS02 dna B V80 C81 G82 R84 K85 I124 R127 K131 K136 L137 N138 Q139 Y140 V82 C83 G84 R86 K87 I126 R129 K133 K138 L139 N140 Q141 Y142
BS03 MN B D49 D51 D51 D53
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0003887 DNA-directed DNA polymerase activity
GO:0016779 nucleotidyltransferase activity
GO:0046872 metal ion binding
Biological Process
GO:0006259 DNA metabolic process
GO:0006281 DNA repair
GO:0006303 double-strand break repair via nonhomologous end joining
GO:0071897 DNA biosynthetic process
Cellular Component
GO:0044423 virion component

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8ilg, PDBe:8ilg, PDBj:8ilg
PDBsum8ilg
PubMed37958741
UniProtP42494|DPOLX_ASFB7 Repair DNA polymerase X (Gene Name=Ba71V-97)

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