Structure of PDB 8ij9 Chain B

Receptor sequence
>8ij9B (length=166) Species: 10090 (Mus musculus) [Search protein sequence]
PLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLED
RTVRLQLWDTAGLERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWID
DVRTERGSDVIIMLVGNKTDLADKRQITIEEGEQRAKELSVMFIETSAKT
GYNVKQLFRRVASALP
3D structure
PDB8ij9 Structural basis of ELKS/Rab6B interaction and its role in vesicle capturing enhanced by liquid-liquid phase separation.
ChainB
Resolution2.04 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.6.5.2: small monomeric GTPase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 GTP B Q22 S23 V24 G25 K26 T27 S28 F38 N40 Y42 T45 G71 N126 K127 D129 L130 S156 A157 K158 Q13 S14 V15 G16 K17 T18 S19 F29 N31 Y33 T36 G62 N117 K118 D120 L121 S147 A148 K149
BS02 MG B T27 T45 T18 T36
Gene Ontology
Molecular Function
GO:0003924 GTPase activity
GO:0005525 GTP binding

View graph for
Molecular Function
External links
PDB RCSB:8ij9, PDBe:8ij9, PDBj:8ij9
PDBsum8ij9
PubMed37172719
UniProtP61294|RAB6B_MOUSE Ras-related protein Rab-6B (Gene Name=Rab6b)

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