Structure of PDB 8if2 Chain B

Receptor sequence
>8if2B (length=199) Species: 2697049 (Severe acute respiratory syndrome coronavirus 2) [Search protein sequence]
FPNITNLCPFDEVFNATTFASVYAWNRKRISNCVADYSVLYNFAPFFAFK
CYGVSPTKLNDLCFTNVYADSFVIRGNEVSQIAPGQTGNIADYNYKLPDD
FTGCVIAWNSNKLDSTVGGNYNYRYRLFRKSKLKPFERDISTEIYQAGNK
PCNGVAGVNCYFPLQSYGFRPTYGVGHQPYRVVVLSFELLHAPATVCGP
3D structure
PDB8if2 Convergent evolution of SARS-CoV-2 Omicron subvariants leading to the emergence of BQ.1.1 variant.
ChainB
Resolution2.78 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 MAN B N405 Q409 G416 N417 N77 Q81 G88 N89
External links
PDB RCSB:8if2, PDBe:8if2, PDBj:8if2
PDBsum8if2
PubMed37169744
UniProtP0DTC2|SPIKE_SARS2 Spike glycoprotein (Gene Name=S)

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