Structure of PDB 8ic1 Chain B

Receptor sequence

>8ic1B (length=479) Species: 69365 (Microbacterium arabinogalactanolyticum) [Search protein sequence]

TTSRTPATVVEKLTGPDAPNNTWGRWDIKATDLGIMWDDGAGHVLTAFGN
TFGNSWTGPGGGAPPNGNWRSNVLVRSSDGDLADGMLFDWAAQGPQGVAR
EIIPSKKINGVEITTIPTTGISVGKRQYLGFMSVKQWGPPGVWDTNFAGI
AYSDDGGGTWKVSDTRWENADGHDPFQMQAWVQKGGTIYVFGTQNGRNGP
ASVAKVPASKLLDKSAFRYWNGTDWSRKESDAVPVMDAPMSEMSVQYDAY
SKRFLMMTLSGEDIIMRTATAPEGPWTPAQTVASSTDYPALYGGYFHPWN
KDGEIYFTMSQWNPYNVYLMRLRIDRDGNIIDPNLVTDASFERSTTLGDG
TNGTWAAKPNSGIDNAPAAGFTGDHRAFVRYNSGWRDIWQDVAVERGAKY
RLTGFLRTSVNSDNGFFGARTLDGVPIGEINFHSVGAWTRFTVEFDAGDR
DAVQVFGGVWTNSGDIWMQLDDVSLTKVR

3D structure

PDB

8ic1 Identification and characterization of endo-alpha-, exo-alpha-, and exo-beta-D-arabinofuranosidases degrading lipoarabinomannan and arabinogalactan of mycobacteria.

Chain

Resolution

1.8 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)
BS01	BXY	B	D33 G50 N51 I117 W138	D32 G49 N50 I116 W137
BS02	BXY	B	P141 R198 W313	P140 R197 W312
BS03	BXY	B	R198 A291 L292	R197 A290 L291
BS04	CA	B	S341 E343 T373 H376 D472	S340 E342 T372 H375 D471
BS05	OYO	B	N51 G62 G63 W138 Y316	N50 G61 G62 W137 Y315

External links

PDB	RCSB:8ic1, PDBe:8ic1, PDBj:8ic1
PDBsum	8ic1
PubMed	37726269

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