Structure of PDB 8hwk Chain B

Receptor sequence
>8hwkB (length=827) Species: 1598 (Limosilactobacillus reuteri) [Search protein sequence]
GPGTWENMAFAQDSSAINNINGYLSYTGWYRPYGTSQDGKTWYPTTVADW
RPILMYVWPSKDVQVKFIQYFVNHGYENSNYGLTAGSVKDLSENTASINL
NEVAQNLRYVIEQHIVAAKSTSQLANDINNFITTIPELSASSELPDESGY
GQVIFVNNDNTSYADSKYRLMSRTINNQTGNDNSGDNGYEFLTGIDIDNS
NPVVQAENLNWEYFLLNYGKLMGYNPDGNFDGFRIDAADHIDADVLDQMG
QLMDDMYHMKGNPQNANNHLSYNEGYRSSAARMLNKKGNPQLYMDYVGST
LGNVLGRANNRDTISNLITGSIVNRQNDVTENEATPNWSFVTNHDQRANL
INGLIIKDHPGAYKAEYANQAWQEFYADQKKTDKQYAQYNVPAQYAILLS
NKDTVPQIYYGDLYNETAQYMQEKSIYYDAITTLMKARKQFVSGGQTMTK
LSDNLIASVRYGKGVANANSEGTDSLSRTSGMAVIVGNNPQMAEQTISIN
MGRAHANEQYRNLLDTTDNGLTYNADGAENPETLTTDDNGILKVTVKGYS
NPYVSGYLGVWVPVVSVNQDVTTNAATVSADSNKIFESNAALDSHMIYQD
FSLYQPEPISTENHAYNIIAQNAELFNNLGITDFWMAPPYTQYSESRYND
GYSVTDRYNLGTNANPTKYGSGEELANAIAALHSAGLKAQVDIVMNQMIG
LPGQEAVTVTRADNRGMQTDVNGKTYANQMYFAYTTGGGNGQETYGGKYL
SELQSKYPDLFTTRAISTGVAPDPTTHITKWSAKYENGTSLQNIGIGLAV
KLPNGEYAYLRSSDNKSFNTLLPSEIS
3D structure
PDB8hwk The evolutionary advantage of a tunnel structure at donor subsites on the processive mechanism
ChainB
Resolution2.9 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 2.4.1.5: dextransucrase.
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 GLC B Q667 N674 Q642 N649
BS02 GLC B E632 N674 P691 T692 K693 E607 N649 P666 T667 K668
BS03 GLC B P633 H639 P608 H614
Gene Ontology
Molecular Function
GO:0016757 glycosyltransferase activity
GO:0016787 hydrolase activity
GO:0046527 glucosyltransferase activity
Biological Process
GO:0009250 glucan biosynthetic process

View graph for
Molecular Function

View graph for
Biological Process
External links
PDB RCSB:8hwk, PDBe:8hwk, PDBj:8hwk
PDBsum8hwk
PubMed38427803
UniProtA0A848PDI7

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