Structure of PDB 8hg9 Chain B

Receptor sequence
>8hg9B (length=385) Species: 1409 (Bacillus sp. (in: firmicutes)) [Search protein sequence]
VIPVNEITNFKSRAEEFFPIEWYKDMLHHHPVYYHEQTNTWNVFTYEGVK
QVLGNYEFFSSAGPRTTLTNLTLVDPPDHRKGRSLLAAAFTPRSLKNWEP
RIKQIAEELVENIQDNNEINIVEALAAPLPSMVIADLFGVPIQDRAQFKE
WVDILFQPDIELQKQNAAKEYFQYLYPIVVQKRSNLSDDIISDLIQAEVD
GEKFTDNEIVQVTMLLLGAGVETTSHAIANTFYSLLYDDESLYGELRNDL
ELVPNAVEEMLRYRFHMSRRDRTVKKDNNLLGVELKEGDVVIAWMSACNM
DHRMFDDPFSINIHRPNNKKHLTFGNGPHFCLGAPLARLEMKIALETFVK
KFSSIEPVEGFELEKNLTASATGQSLTNLPMNVYK
3D structure
PDB8hg9 Crystal Structure and Biochemical Analysis of a Cytochrome P450 Steroid Hydroxylase ( Ba CYP106A6) from Bacillus Species.
ChainB
Resolution2.79 Å
3D
structure
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Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 HEM B L89 H97 R101 F108 L241 A244 G245 T248 F290 R295 R297 T348 F349 H354 C356 G358 L71 H79 R83 F90 L216 A219 G220 T223 F265 R270 R272 T323 F324 H329 C331 G333
Gene Ontology
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UnboundLocalError
Python 3.6.8: /usr/bin/python3
Wed Nov 27 21:43:55 2024

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1443                 pubmed=display_regular_ligand(pdbid,asym_id,lig3,ligIdx,title)
   1444         else:
=> 1445             pubmed,uniprot=display_protein_receptor(pdbid,asym_id,title)
   1446     
   1447     uniprot_line=''
pubmed = '', uniprot = '', display_protein_receptor = <function display_protein_receptor>, pdbid = '8hg9', asym_id = 'B', title = 'Crystal Structure and Biochemical Analysis of a ...Hydroxylase ( Ba CYP106A6) from Bacillus Species.'
 /var/www/html/BioLiP/pdb.cgi in display_protein_receptor(pdbid='8hg9', asym_id='B', title='Crystal Structure and Biochemical Analysis of a ...Hydroxylase ( Ba CYP106A6) from Bacillus Species.')
    839 
    840     if go:
=>  841         display_go(go,uniprot,pdbid,asym_id)
    842     return pubmed,uniprot
    843 
global display_go = <function display_go>, go = '0004497,0005506,0016705,0020037', uniprot = '', pdbid = '8hg9', asym_id = 'B'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0004497,0005506,0016705,0020037', uniprot='', pdbid='8hg9', asym_id='B')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>