Structure of PDB 8h0d Chain B

Receptor sequence
>8h0dB (length=387) Species: 663 (Vibrio alginolyticus) [Search protein sequence]
VSAAEVVSAQENQTYTYVRCWYRTSHSKDDAATDWKWAKNQDGSDFTIDG
YWWSSVSFKNMFYTNTSQNVIRQRCEETLDLANENADITFFAADNRYSYN
HTIWSNDAAMQPDQINKVVALGDSLSDTGNIFNASQWRFPNPNSWFLGHF
SNGFVWTEYVAKAKNLPLYNWAVGGAAGENQYIALTGVGEQVSSYLTYTK
LAKNYNPANTLFTLEFGLNDFMNYNRSVPEVKADYAEALIRLTDAGAKNF
MLMTLPDATKAPQFKYSTQEEIETIRAKVLKMNEFIKAQAMYYKAQGYNI
ALFDTHALFEKLTSAPEEHGFVNASDPCLDINRSSSVDYMYTHSLRSECA
ASGADKFVFWDVTHPTTATHRYVAEKMLESSNNLEEF
3D structure
PDB8h0d Catalytic site flexibility facilitates the substrate and catalytic promiscuity of Vibrio dual lipase/transferase.
ChainB
Resolution2.01 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 1PS B R125 Y126 S127 Y128 Q165 W166 R96 Y97 S98 Y99 Q136 W137
BS02 1PS B K88 M90 T131 N159 N199 W200 S223 Y227 K59 M61 T102 N130 N170 W171 S194 Y198
BS03 MG B E208 D263 E179 D234
Gene Ontology
Molecular Function
GO:0016298 lipase activity
GO:0016788 hydrolase activity, acting on ester bonds
Biological Process
GO:0006629 lipid metabolic process

View graph for
Molecular Function

View graph for
Biological Process
External links
PDB RCSB:8h0d, PDBe:8h0d, PDBj:8h0d
PDBsum8h0d
PubMed37558668
UniProtA0A7Y4B3E8

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