Structure of PDB 8g9l Chain B

Receptor sequence
>8g9lB (length=186) Species: 8355 (Xenopus laevis) [Search protein sequence]
ISLEQIDGFAAKSFPLCMRQLHKSLRENHHLRHGGRMQYGLFLKGIGLTL
EQALQFWRLEFTKGKVDSEKFDKVYAYSIRHNYGKEGKRTDYTPYSCMKV
ILSNPPSQGDYHGCPFRHSDPELLKQKLQSFKVPSSGINQILELVKGMHY
QLACQKYFELTHSVDDCGFSLNHPNQYFAESQKLLT
3D structure
PDB8g9l A mechanistic model of primer synthesis from catalytic structures of DNA polymerase alpha-primase.
ChainB
Resolution3.3 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna B H309 M313 K349 Y353 H357 Y368 T369 H33 M37 K73 Y77 H81 Y92 T93
BS02 rna B H306 R308 H309 R312 H30 R32 H33 R36
BS03 SF4 B P291 C293 C373 C390 C430 P15 C17 C97 C114 C154
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0046872 metal ion binding
GO:0051539 4 iron, 4 sulfur cluster binding
Biological Process
GO:0006260 DNA replication
GO:0006261 DNA-templated DNA replication
GO:0006269 DNA replication, synthesis of primer
GO:0006270 DNA replication initiation
Cellular Component
GO:0005658 alpha DNA polymerase:primase complex
GO:1990077 primosome complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8g9l, PDBe:8g9l, PDBj:8g9l
PDBsum8g9l
PubMed38491139
UniProtA0A1L8G3G3

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