Structure of PDB 8g0v Chain B

Receptor sequence

>8g0vB (length=665) Species: 5207 (Cryptococcus neoformans)

VHHVHPLPDSVPESEDLFAPPPRMQGKEGRPKPHIGPNYESYVKEWAKTV
GPNSDEWWAAKARETLDWYDDFKTVRAGGFEHGDVQWFPEGTLNAAYNCL
DRHYYKNPKKTAIIYEADEPSESREVSYEELMQETCRVANVLKSYGVKKG
DAVSIYLPMTWQAAAAFLACARIGAIHSAVFAGFSAESLRDRVNDCECKV
LITTDEGRRGGKTIATKQIVDAALQQCPLVENVLVLRRTGNKVPMTEGRD
KWWDEECAKMPAYCPCERMASEDPLFILYTSGKPKGVVHSTAGYLLGTAL
TLKYVFDAHPDDRFACMADIGWITGHSYIIYGPLANGITTAVFESTPVYP
TPSRYWDFVDKWKATQLYTAPTAIRLLRRMGEDHVKNHDLSSLRVLGSVG
EPINPEAWHWYNDFAGKNQCAIVDTYWMTETGSISIAPLPGAISTKPGSA
TFPFFGMDVDIIDPQTGQVLEGNDVEGVLVARRPWPSIARTVYRDHKRYL
ETYMKPYPGYFFFGDGAARDYDGYMWIKGRVDDVINVSGHRLSTAEVESA
LILHKGVAETAVVGCADDLTGQAVYAFVTMKPEFDLKATKEADLSKELAI
QVRKVIGPFAAPKKIYLVSDLPKTRSGKIMRRVLRKIVAGEGDQLGDLSS
IADPQIVEEVKQKVT

3D structure

• PDB: 8g0v Crystal Structure of Acetyl-CoA synthetase in complex with a propyne ester AMP inhibitor from Cryptococcus neoformans H99
• Chain: B
• Resolution: 1.9 Å

Enzymatic activity

• Enzyme Commision number: 6.2.1.1: acetate--CoA ligase.

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	YHT	B	W334 I335 V411 G412 E413 P414 T437 Y438 W439 M440 T441 D527	W322 I323 V399 G400 E401 P402 T425 Y426 W427 M428 T429 D515

Gene Ontology

Molecular Function

• GO:0003987 acetate-CoA ligase activity
• GO:0005524 ATP binding
• GO:0016208 AMP binding
• GO:0016874 ligase activity
• GO:0046872 metal ion binding

Biological Process

• GO:0006085 acetyl-CoA biosynthetic process
• GO:0019427 acetyl-CoA biosynthetic process from acetate

Cellular Component

• GO:0005829 cytosol

External links

• PDB: RCSB:8g0v, PDBe:8g0v, PDBj:8g0v
• PDBsum: 8g0v
• UniProt: J9VFT1