Structure of PDB 8fym Chain B

Receptor sequence

>8fymB (length=221) Species: 10090 (Mus musculus) [Search protein sequence]

QVQLQQSGTDLVRPGTSVKVSCKASGYAFTTYFIEWVKQRPGQGLEWIGV
INPGSGIPNYNEMFKGKATLTADKSSSTAYLHLSSLTSDDSAVYFCARAP
YYYGSSYYYFDVWGAGTTVTVSSASTKGPSVFPLAPSSKGTAALGCLVKD
YFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTY
ICNVNHKPSNTKVDKKVEPKS

3D structure

PDB

8fym Crystal structure of Fab235 in complex with MPER peptide

Chain

Resolution

2.45 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	peptide	B	F33 N52 G54 I57 N59 Y101 Y103 G104 S106	F33 N52 G54 I57 N59 Y101 Y103 G104 S106

External links

PDB	RCSB:8fym, PDBe:8fym, PDBj:8fym
PDBsum	8fym
PubMed	37940661

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