Structure of PDB 8f5m Chain B

Receptor sequence
>8f5mB (length=591) Species: 466052 (Oshimavirus P7426) [Search protein sequence]
ERIGTLLGWNLLEFPKERVRELQSTAEPTEGSYRNILDGLVNLVKEALGH
IPDALIGKDNVVMWPGSTGANFHLPGWRVSDFVRAPSRARTELPTSSLTL
IRGKKVFGDGIVGIFPPMPEIVPSPNGWAQVRMFSRRGNEIFRAWKGVIV
THPNVKEPLVAFDDGYGVEELGDVLEIHAILLQTQFTAEYTVQGLYYQGI
PGWWRYLDLDFAFPPDKAKLVEAGAPLELLYPIAQYLKLKGPNTGFGGIL
LSPKILPFLGLHGLEDGGLLAYTRRWRPGERVIFNRRPDLPTGQSAVELT
YLGLSPIADSVIAHEGDIASTGADYDGDIGYLFPTPEKGGLYMPFHGEAL
HRKDLPTKDYESGLHRWAGQVHAAHILGRVEVNTRRLLDVAWANGEDVPQ
DYLHAATEMIQVAVDRQKRDIQWPDFDFKSVKDPVMTDFWRLAVPGGKLT
PEGNTPAAKITNRWRAWETLDGYVGHPHMKNDLKPLASKISRVLARGEHR
RPGPVLAALAFALLAPEPRPKEVEDLLTAGLQSGKRHAVYDALVQMGLPA
NQATDHPELWLRLASKEELEAIFKQLGYRPAMEELEEALNA
3D structure
PDB8f5m Tail-tape-fused virion and non-virion RNA polymerases of a thermophilic virus with an extremely long tail.
ChainB
Resolution2.4 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 MG B D327 D329 D331 D324 D326 D328
Gene Ontology
Molecular Function
GO:0046872 metal ion binding

View graph for
Molecular Function
External links
PDB RCSB:8f5m, PDBe:8f5m, PDBj:8f5m
PDBsum8f5m
PubMed38182597
UniProtA7XXN5

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