Structure of PDB 8ezf Chain B

Receptor sequence
>8ezfB (length=416) Species: 220668 (Lactiplantibacillus plantarum WCFS1) [Search protein sequence]
SVAIDLPYDKRTITAQIDDENYAGKLVSQAATYHNKLSEQETVEKSLDNP
IGSDKLEELARGKHNIVIISSDHTRPVPSHIITPILLRRLRSVAPDAAIA
ILVATGFHRPSTHEELVNKYGEDIVNNEEIVMHVSTDDSSMVKIGQLPSG
GDCIINKVAAEADLLISEGFIESHFFAGFSGGRKSVLPGIASYKTIMANH
SGEFINSPKARTGNLMHNSIHKDMVYAARTAKLAFIINVVLDEDKKIIGS
FAGDMEAAHKVGCDFVKELSSVPAIDCDIAISTNGGYPLDQNIYQAVKGM
TAAEATNKEGGTIIMVAGARDGHGGEGFYHNLADVDDPKEFLDQIPDQWT
AQIFARILVHHHVIFVSDLVDPDLITNMHMELAKTLDEAMEKAYAREGQA
AKVTVIPDGLGVIVKA
3D structure
PDB8ezf Irreversible Inactivation of Lactate Racemase by Sodium Borohydride Reveals Reactivity of the Nickel-Pincer Nucleotide Cofactor
ChainB
Resolution2.15 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 5.1.2.1: lactate racemase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 CA B D396 E400 D387 E391
BS02 ENJ B S71 D72 R75 A104 F107 H108 H174 F176 S180 G181 K184 P188 H200 Y294 K298 S71 D72 R75 A104 F107 H108 H174 F176 S180 G181 K184 P188 H200 Y294 K298
Gene Ontology
Molecular Function
GO:0016853 isomerase activity
GO:0046872 metal ion binding
GO:0050043 lactate racemase activity

View graph for
Molecular Function
External links
PDB RCSB:8ezf, PDBe:8ezf, PDBj:8ezf
PDBsum8ezf
PubMed37886035
UniProtF9USS9|LARA_LACPL Lactate racemase (Gene Name=larA)

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