Structure of PDB 8ep4 Chain B

Receptor sequence
>8ep4B (length=265) Species: 484018 (Phocaeicola plebeius DSM 17135) [Search protein sequence]
SSHHHHHHGSIDFSNAPKRLNNKYPLSDQKNEGGWVLNKKASDEFKGKKL
NEERWFPNNPKWKGRQPTFFAKENTTFEDGCCVMRTYKPEAGSLPEGYTH
TAGFLVSKELFLYGYFEARLRPNDSPWVFGFWMSNNERNWWTEIDICENC
PGNPANRHDLNSNVHVFKAPADKGDIKKHINFPAKYYIPFELQKDFHVWG
LDWSKEYIRLYIDGVLYREIENKYWHQPLRINLNNESNKWFGALPDDNNM
DSEYLIDYVRVWYKK
3D structure
PDB8ep4 The porphyran degradation system of the human gut microbiota is complete, phylogenetically diverse and geographically structured across Asian populations
ChainB
Resolution1.94 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 CA B E46 G82 D259 E44 G80 D257
BS02 CA B D253 E255 D251 E253
Gene Ontology
Molecular Function
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0016787 hydrolase activity
GO:0033916 beta-agarase activity
GO:0046872 metal ion binding
Biological Process
GO:0005975 carbohydrate metabolic process

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Molecular Function
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Biological Process
External links
PDB RCSB:8ep4, PDBe:8ep4, PDBj:8ep4
PDBsum8ep4
PubMed
UniProtB5CYA6

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