Structure of PDB 8dr6 Chain B

Receptor sequence
>8dr6B (length=318) Species: 4932 (Saccharomyces cerevisiae) [Search protein sequence]
TLSLQLPWVEKYRPQVLSDIVGNKETIDRLQQIAKDGNMPHMIISGMPGI
GKTTSVHCLAHELLGRSYADGVLELNASDDRGIDVVRNQIKHFAQKKLHL
PPGKHKIVILDEADSMTAGAQQALRRTMELYSNSTRFAFACNQSNKIIEP
LQSRCAILRYSKLSDEDVLKRLLQIIKLEDVKYTNDGLEAIIFTAEGDMR
QAINNLQSTVAGHGLVNADNVFKIVDSPHPLIVKKMLLASNLEDSIQILR
TDLWKKGYSSIDIVTTSFRVTKNLAQVKESVRLEMIKEIGLTHMRILEGV
GTYLQLASMLAKIHKLNN
3D structure
PDB8dr6 Multistep loading of a DNA sliding clamp onto DNA by replication factor C.
ChainB
Resolution2.39 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna B G85 I86 R90 G82 I83 R87
BS02 AGS B V12 R16 I23 V24 P51 G52 I53 G54 K55 N145 M202 R203 V9 R13 I20 V21 P48 G49 I50 G51 K52 N142 M199 R200
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0003689 DNA clamp loader activity
GO:0005515 protein binding
GO:0005524 ATP binding
GO:0016887 ATP hydrolysis activity
Biological Process
GO:0000077 DNA damage checkpoint signaling
GO:0006260 DNA replication
GO:0006261 DNA-templated DNA replication
GO:0006271 DNA strand elongation involved in DNA replication
GO:0006272 leading strand elongation
GO:0006281 DNA repair
GO:0007062 sister chromatid cohesion
GO:0007064 mitotic sister chromatid cohesion
GO:0090618 DNA clamp unloading
Cellular Component
GO:0005634 nucleus
GO:0005663 DNA replication factor C complex
GO:0005829 cytosol
GO:0031389 Rad17 RFC-like complex
GO:0031390 Ctf18 RFC-like complex
GO:0031391 Elg1 RFC-like complex

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:8dr6, PDBe:8dr6, PDBj:8dr6
PDBsum8dr6
PubMed35939393
UniProtP40339|RFC4_YEAST Replication factor C subunit 4 (Gene Name=RFC4)

[Back to BioLiP]