Structure of PDB 8dr5 Chain B

Receptor sequence
>8dr5B (length=318) Species: 4932 (Saccharomyces cerevisiae) [Search protein sequence]
TLSLQLPWVEKYRPQVLSDIVGNKETIDRLQQIAKDGNMPHMIISGMPGI
GKTTSVHCLAHELLGRSYADGVLELNASDDRGIDVVRNQIKHFAQKKLHL
PPGKHKIVILDEADSMTAGAQQALRRTMELYSNSTRFAFACNQSNKIIEP
LQSRCAILRYSKLSDEDVLKRLLQIIKLEDVKYTNDGLEAIIFTAEGDMR
QAINNLQSTVAGHGLVNADNVFKIVDSPHPLIVKKMLLASNLEDSIQILR
TDLWKKGYSSIDIVTTSFRVTKNLAQVKESVRLEMIKEIGLTHMRILEGV
GTYLQLASMLAKIHKLNN
3D structure
PDB8dr5 Multistep loading of a DNA sliding clamp onto DNA by replication factor C.
ChainB
Resolution2.76 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna B G85 I86 G82 I83
BS02 AGS B R128 R157 R125 R154
BS03 AGS B V12 R16 P17 V24 P51 I53 G54 K55 T56 T57 R174 M202 R203 V9 R13 P14 V21 P48 I50 G51 K52 T53 T54 R171 M199 R200
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0003689 DNA clamp loader activity
GO:0005515 protein binding
GO:0005524 ATP binding
GO:0016887 ATP hydrolysis activity
Biological Process
GO:0000077 DNA damage checkpoint signaling
GO:0006260 DNA replication
GO:0006261 DNA-templated DNA replication
GO:0006271 DNA strand elongation involved in DNA replication
GO:0006272 leading strand elongation
GO:0006281 DNA repair
GO:0007062 sister chromatid cohesion
GO:0007064 mitotic sister chromatid cohesion
GO:0090618 DNA clamp unloading
Cellular Component
GO:0005634 nucleus
GO:0005663 DNA replication factor C complex
GO:0005829 cytosol
GO:0031389 Rad17 RFC-like complex
GO:0031390 Ctf18 RFC-like complex
GO:0031391 Elg1 RFC-like complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8dr5, PDBe:8dr5, PDBj:8dr5
PDBsum8dr5
PubMed35939393
UniProtP40339|RFC4_YEAST Replication factor C subunit 4 (Gene Name=RFC4)

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