Structure of PDB 8dj6 Chain B

Receptor sequence
>8dj6B (length=389) Species: 1078020 (Mycolicibacterium thermoresistibile ATCC 19527) [Search protein sequence]
LTDLKVRLVRDDFADAVAWVARSLPSRPTVPVLAGVLLTGSDDGLTISSF
DYEVSAEVQIPAEIAAPGTVLVSGRLLSEITRALPNKPVDLSVEGTRVSL
TCGSARFSLPTMAVEDYPALPELPAETGSVPADLFAEAIGQVAVAAGRDD
TLPMLTGIRVEISGDRMVLAATDRFRLAVRELTWTTKTPDVEAAVLVPAK
TLAEAAKTGLDGSEVQLALGAGPSVGQDGLLGIRSEGKRSTTRLLDAEFP
KFRQLLPTEHTAMATIGVGELTEAIKRVALVADRGAQVRMEFADDVLHLS
AGADDVGRAEEDLPVSFSGEPLTIAFNPGYLTDGLGALHSERVTFGFTTP
SKPAVLRPATEADAALNGNGPFPAAETDYVYLLMPVRLP
3D structure
PDB8dj6 Interaction of sliding clamp with mycobacterial polymerases
ChainB
Resolution2.5 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide B R181 L262 M391 P392 V393 R394 R174 L255 M384 P385 V386 R387
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0003887 DNA-directed DNA polymerase activity
GO:0008408 3'-5' exonuclease activity
Biological Process
GO:0006260 DNA replication
GO:0006271 DNA strand elongation involved in DNA replication
GO:0071897 DNA biosynthetic process
Cellular Component
GO:0005737 cytoplasm
GO:0009360 DNA polymerase III complex

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:8dj6, PDBe:8dj6, PDBj:8dj6
PDBsum8dj6
PubMed
UniProtG7CIP4

[Back to BioLiP]