Structure of PDB 8dht Chain B

Receptor sequence
>8dhtB (length=440) Species: 2234 (Archaeoglobus fulgidus) [Search protein sequence]
AEFEIYREYVDKSYEPQKDDIVAVFRITPAEGFTIEDAAGAVAAESSTGT
WTSLHPWYDEERVKGLSAKAYDFVDLGDGSSIVRIAYPSELFEPHNMPGL
LASIAGNVFGMKRVKGLRLEDLQLPKSFLKDFKGPSKGKEGVKKIFGVAD
RPIVGTVPKPKVGYSAEEVEKLAYELLSGGMDYIKDDENLTSPAYCRFEE
RAERIMKVIEKVEAETGEKKSWFANITADVREMERRLKLVAELGNPHVMV
DVVITGWGALEYIRDLAEDYDLAIHGHRAMHAAFTRNAKHGISMFVLAKL
YRIIGIDQLHIGTAGAGKLEGQKWDTVQNARIFSEVEYTPDEGDAFHLSQ
NFHHIKPAMPVSSGGLHPGNLEPVIDALGKEIVIQVGGGVLGHPMGAKAG
ARAVRQALDAIISAIPLEEHAKQHPELQAALEKWGRVTPI
3D structure
PDB8dht Crystal structure of a type III Rubisco in complex with its product 3-phosphoglycerate.
ChainB
Resolution1.699 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 4.1.1.39: ribulose-bisphosphate carboxylase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 MG B K186 D188 E189 K185 D187 E188
Gene Ontology
Molecular Function
GO:0000287 magnesium ion binding
GO:0016491 oxidoreductase activity
GO:0016829 lyase activity
GO:0016984 ribulose-bisphosphate carboxylase activity
GO:0046872 metal ion binding
Biological Process
GO:0006196 AMP catabolic process
GO:0015977 carbon fixation

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Molecular Function
View graph for
Biological Process
External links
PDB RCSB:8dht, PDBe:8dht, PDBj:8dht
PDBsum8dht
PubMed36151846
UniProtO28635|RBL_ARCFU Ribulose bisphosphate carboxylase (Gene Name=rbcL)

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