Structure of PDB 8csq Chain B

Receptor sequence
>8csqB (length=220) Species: 9606 (Homo sapiens) [Search protein sequence]
STDFNDKILNEPLKHSDFFNVKELFSVRSLFDARVHLGHKAGCRHRFMEP
YIFGSRLDHDIIDLEQTATHLQLALNFTAHMAYRKGIILFISRNRQFSYL
IENMARDCGEYAHTRYFRGGMLTNARLLFGPTVRLPDLIIFLHTLNNIFE
PHVAVRDAAKMNIPTVGIVDTNCNPCLITYPVPGNDDSPLAVHLYCRLFQ
TAITRAKEKRQQVEALYRLQ
3D structure
PDB8csq Principles of mitoribosomal small subunit assembly in eukaryotes.
ChainB
Resolution2.54 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna B R100 R147 R149 Y170 G173 G174 T177 N178 L181 N200 N201 I202 R210 K214 R46 R93 R95 Y116 G119 G120 T123 N124 L127 N146 N147 I148 R156 K160
BS02 peptide B R149 Q150 R95 Q96
BS03 MG B H93 D224 D240 D241 H39 D170 D186 D187
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
Biological Process
GO:0006412 translation
GO:0032543 mitochondrial translation
GO:0061668 mitochondrial ribosome assembly
Cellular Component
GO:0005739 mitochondrion
GO:0005743 mitochondrial inner membrane
GO:0005759 mitochondrial matrix
GO:0005763 mitochondrial small ribosomal subunit
GO:0005840 ribosome
GO:0015935 small ribosomal subunit
GO:1990904 ribonucleoprotein complex

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:8csq, PDBe:8csq, PDBj:8csq
PDBsum8csq
PubMed36482135
UniProtQ9Y399|RT02_HUMAN Small ribosomal subunit protein uS2m (Gene Name=MRPS2)

[Back to BioLiP]