Structure of PDB 8csf Chain B

Receptor sequence
>8csfB (length=391) Species: 577 (Raoultella terrigena) [Search protein sequence]
GLAVFLPPYPFRGLKAPYLWMFYKYLHCATDSILFITGEDYLSVTDAQRA
RWEFDPASMASLGYELPNAQSMACHEYLTLDNAFYETLLSRHHHDPIKSF
SAFLTERIPDLETELHALLDSKKGIIDQIDTFISICNCPSLEHVARTLGK
EVMHIEIGPLRAPMYRNTAYLDFAGVNGGTEASARYEKCQAEFDIKASLG
DLHNYFLEVLPPAEHSAAGVVLQVEDCSNLIAYNHDFTNISLLSYVRQRY
EKEDILVRAHPGSLFRLRDDVFTIDDSANSLAFINQCNEVFTINSSVGLE
AILTGKKTTVLGDCSYAFINELAGASATVNAAAFYLFSYLVPFDLVFNQE
YLKFRLGHPEEREIVGKHIEFYSADHSLSSLINEAISLEHH
3D structure
PDB8csf The retaining beta-Kdo glycosyltransferase WbbB uses a double-displacement mechanism with an intermediate adduct rearrangement step.
ChainB
Resolution2.4 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 RAM B R12 Y18 W20 E158 R12 Y18 W20 E156
BS02 C5P B R163 V226 L227 R263 A264 H265 P266 S285 S300 S301 V302 R161 V221 L222 R258 A259 H260 P261 S280 S295 S296 V297
BS03 KDO B R163 N179 C232 S233 R161 N177 C227 S228
Gene Ontology
Biological Process
GO:0000271 polysaccharide biosynthetic process
GO:0015774 polysaccharide transport

View graph for
Biological Process
External links
PDB RCSB:8csf, PDBe:8csf, PDBj:8csf
PDBsum8csf
PubMed36271007
UniProtQ6U8B0

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