Structure of PDB 8csd Chain B

Receptor sequence
>8csdB (length=393) Species: 577 (Raoultella terrigena) [Search protein sequence]
GLAVFLPPYPFRGLKAPYLWMFYKYLHCATDSILFITGEDYLSVTDDEAQ
RARWEFDPASMASLGYELPNAQSMACHEYLTLDNAFYETLLSRHHHDPIK
SFSAFLTERIPDLETELHALLDSKKGIIDQIDTFISICNCPSLEHVARTL
GKEVMHIEIGPLRAPMYRNTAYLDFAGVNGGTEASARYEKCQAEFDIKAS
LGDLHNYFLEVLPPAEAATHSAAGVVLQVEDCSNLIAYNHDFTNISLLSY
VRQRYEKEDILVRAHPGSLFRLRDDVFTIDDSANSLAFINQCNEVFTINS
SVGLEAILTGKKTTVLGDCSYAFINELAGASATVNAAAFYLFSYLVPFDL
VFNQEYLKFRLGHPEEREIVGKHIEFYSAHSLSSLINEAISLE
3D structure
PDB8csd The retaining beta-Kdo glycosyltransferase WbbB uses a double-displacement mechanism with an intermediate adduct rearrangement step.
ChainB
Resolution1.95 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 C5P B R163 L227 R263 H265 P266 S285 S300 S301 V302 R163 L227 R263 H265 P266 S285 S300 S301 V302
BS02 KDO B R12 E158 R163 N179 C232 S233 H265 R12 E158 R163 N179 C232 S233 H265
Gene Ontology
Biological Process
GO:0000271 polysaccharide biosynthetic process
GO:0015774 polysaccharide transport

View graph for
Biological Process
External links
PDB RCSB:8csd, PDBe:8csd, PDBj:8csd
PDBsum8csd
PubMed36271007
UniProtQ6U8B0

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