Structure of PDB 8cqc Chain B

Receptor sequence
>8cqcB (length=217) Species: 86473 (uncultured Gammaproteobacteria bacterium) [Search protein sequence]
DASDYTGVSFWLVTAALLASTVFFFVERDRVSAKWKTSLTVSGLVTGIAF
WHYMYMRGVWIETGDSPTVFRYIDWLLTVPLLICEFYLILAAATNVAGSL
FKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKS
ACNTASPAVQSAYNTMMYIIIFGWAIYPVGYFTGYLNLNLIYNLADFVNK
ILFGLIIWNVAVKESSN
3D structure
PDB8cqc Structural insights into proteorhodopsin biogenesis and retinal scavenging
ChainB
Resolution2.82 Å
3D
structure
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Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 RET B Y96 W99 V103 M135 G139 G156 W198 Y201 K232 Y72 W75 V79 M111 G115 G132 W174 Y177 K200
External links
PDB RCSB:8cqc, PDBe:8cqc, PDBj:8cqc
PDBsum8cqc
PubMed39138159
UniProtQ6J4G7|PRRG_UNKP Green-light absorbing proteorhodopsin

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