Structure of PDB 8c7u Chain B

Receptor sequence
>8c7uB (length=261) Species: 226185 (Enterococcus faecalis V583) [Search protein sequence]
AMATLLEKTRQVNELLQKNNLFDVQAELPYNKMAMILGDILESNAYIISS
SGDLLGYTEKLDVNNARIKNMFKEKKFPQGYTEAVDMLKVTEANIPIDSD
LTAFPFESRELYPFGLTTIVPLYGAGKRLGTIILARVEKSFNEDDLVLAE
YSATVVGMQILYHQSRTIEAEVRSATAVQMAINTLSYSELKAVHAIFEAL
DGEEGRLTASSIADEIGITRSVIVNALRKLESAGIIESRSLGMKGTYLKV
LNQQFIKELEK
3D structure
PDB8c7u Structural insights into CodY activation and DNA recognition.
ChainB
Resolution3.15 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna B T207 A208 S209 V223 R227 S239 M242 G244 T245 T208 A209 S210 V224 R228 S240 M243 G245 T246
BS02 dna B S185 S187 T218 S220 G241 M242 K243 S186 S188 T219 S221 G242 M243 K244
BS03 LEU B R66 M70 T101 A102 F103 R67 M71 T102 A103 F104
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0003700 DNA-binding transcription factor activity
GO:0005525 GTP binding
Biological Process
GO:0006355 regulation of DNA-templated transcription
GO:0045892 negative regulation of DNA-templated transcription
Cellular Component
GO:0005737 cytoplasm

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8c7u, PDBe:8c7u, PDBj:8c7u
PDBsum8c7u
PubMed37326020
UniProtQ834K5

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