Structure of PDB 8byx Chain B

Receptor sequence
>8byxB (length=62) Species: 9606 (Homo sapiens) [Search protein sequence]
GRKKRIPYSKGQLRELEREYAANKFITKDKRRKISAATSLSERQITIWFQ
NRRVKEKKVLAK
3D structure
PDB8byx HOXB13-homodimer bound to DNA
ChainB
Resolution3.0 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna B K218 R220 I221 P222 Y223 Q259 I262 N266 K270 K3 R5 I6 P7 Y8 Q44 I47 N51 K55
BS02 dna B R220 F240 R246 Q265 R268 R5 F25 R31 Q50 R53
Gene Ontology
Molecular Function
GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0003677 DNA binding
Biological Process
GO:0006355 regulation of DNA-templated transcription

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:8byx, PDBe:8byx, PDBj:8byx
PDBsum8byx
PubMed
UniProtQ92826|HXB13_HUMAN Homeobox protein Hox-B13 (Gene Name=HOXB13)

[Back to BioLiP]