Structure of PDB 7yx3 Chain B

Receptor sequence
>7yx3B (length=649) Species: 212035 (Acanthamoeba polyphaga mimivirus) [Search protein sequence]
NLTGDIVIIGAGAAGSLLAHYLARFSNMKIILLEAGHSHFNDPVVTDPMG
FFGKYNPPNENISMSQNPSYSWQGAQEPNTGAYGNRPIIAHGMGFGGSTM
INRLNLVVGGRTVFDNDWPVGWKYDDVKNYFRRVLVDINPVRDNTKASIT
SVALDALRIIAEQQIASGEPVDFLLNKATGNVPNVEKTTPDAVPLNLNDY
EGVNSVVAFSSFYMGVNQLSDGNYIRKYAGNTYLNRNYVDENGRGIGKFS
GLRVVSDAVVDRIIFKGNRAVGVNYIDREGIMHYVKVNKEVVVTSGAFYT
PTILQRSGIGDFTYLSSIGVKNLVYNNPLVGTGLKNHYSPVTITRVHGEP
SEVSRFLSNMAANPTNMGFKGLAELGFHRLDPNKPANANTVTYRKYQLMM
TAGVGIPAEQQYLSGLSPSSNNLFTLIADDIRFAPEGYIKIGTPNIPRDV
PKIFFNTFVTYTPTSAPADQQWPIAQKTLAPLISALLGYDIIYQTLISMN
QTARDSGFQVSLEMVYPLNDLIYKLHNGLATYGANWWHYFVPTLVGDDTP
AGREFADTLSKLSYYPRVGAHLDSHQGCSCSIGRTVDSNLKVIGTQNVRV
ADLSAAAFPPGGNTWATASMIGARAVDLILGFPYLRDLPVNDVPILNVN
3D structure
PDB7yx3 The giant mimivirus 1.2 Mb genome is elegantly organized into a 30-nm diameter helical protein shield.
ChainB
Resolution4.0 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 1.-.-.-
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 FAD B A64 G65 A66 A88 G145 G150 S151 N155 R156 N158 V312 V313 S348 G349 S627 N666 T667 W668 A11 G12 A13 A35 G92 G97 S98 N102 R103 N105 V259 V260 S295 G296 S574 N613 T614 W615
Gene Ontology
Molecular Function
GO:0016491 oxidoreductase activity
GO:0016614 oxidoreductase activity, acting on CH-OH group of donors
GO:0042802 identical protein binding
GO:0050660 flavin adenine dinucleotide binding
Cellular Component
GO:0016020 membrane
GO:0033644 host cell membrane
GO:0044423 virion component

View graph for
Molecular Function
View graph for
Cellular Component
External links
PDB RCSB:7yx3, PDBe:7yx3, PDBj:7yx3
PDBsum7yx3
PubMed35900198
UniProtQ5UPL2|YR135_MIMIV Putative GMC-type oxidoreductase R135 (Gene Name=MIMI_R135)

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