Structure of PDB 7yl5 Chain B

Receptor sequence

>7yl5B (length=388) Species: 1360 (Lactococcus lactis subsp. lactis) [Search protein sequence]

TSRDITVYPKDFLTYFQRNGSAAGFDYDLATYTQTLTPNKASQAGNVTLK
TKVDMSQNFTFTGKINLGDKAQNAGGADGVGFLFHPGDTNVVGAPGGAAG
IGGVNGAFGFKLDTYYNGVGENSFTPDPSNFKGKPFGAFVDGLNGQAKTI
ASSAQSISEPSNNNFVDFTMSYNGATKVMSVTYGGQTWTQDVSSFVGTNQ
AMSFSIAASTGAFMNLQQLRNVNFTYTVAQGTVIANYVDEQGNTIAQQET
TSGDIDTPYVTSQKTIPGYTFKASNGAATSGNYAANDQTVNYVYTRNQGS
IDVTYIDQTTGQTLSKKDLSGGTGDSSNYTTTDTIKSYTDAGYELVSDNY
PSGGTVFTDTAQHYVVNLKQKLVVSSSVTTNQVTGEKT

3D structure

PDB

7yl5 Cell-surface protein YwfG of Lactococcus lactis binds to alpha-1,2-linked mannose.

Chain

Resolution

3.0 Å

3D
structure

[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]

Enzymatic activity

Enzyme Commision number

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)
BS01	CA	B	D152 Y154 N156 D166	D113 Y115 N117 D127
BS02	MAN	B	D117 Y154 G250 A251 F252	D78 Y115 G211 A212 F213
BS03	MAN	B	D180 S233 F234	D141 S194 F195

External links

PDB	RCSB:7yl5, PDBe:7yl5, PDBj:7yl5
PDBsum	7yl5
PubMed	36602978
UniProt	S6FKX6

[Back to BioLiP]