Structure of PDB 7yd2 Chain B

Receptor sequence
>7yd2B (length=349) Species: 405005 (Hansschlegelia zhihuaiae) [Search protein sequence]
KRKVVLAEQGSFYIGGRTVTGPGKFDPSKPVIRYSNEGATFYINQMYVNF
QAPVRPRGLPLVFWHGGGLTGHIWESTPDGRPGFQTLFVQDRHTVYTIDQ
PGRGRGNIPTFNGPFGQLEEESIVNTVTGNSSKEGAWVRDRLGPAPGQFF
ENSQFPRGYEDNYFKEMGFSPSISSDEIVDAVVKLVTHIGPCVLVTHAAS
GVLGMRVATHAKNVRGIVAYEPATSIFPKGKVPEIPPLADKKSQIFPPFE
IQESYFKKLAKIPIQFVFGDNIPKNPKSAYWFLDWWRVTRYAHSLSLEAI
NKLGGQASLLDLPTAGLRGNTHFPFTDRNNVQVASLLSDFLGKHGLDQN
3D structure
PDB7yd2 Crystal structures of herbicide-detoxifying esterase reveal a lid loop affecting substrate binding and activity.
ChainB
Resolution1.61 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 3.1.1.-
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 IJC B V42 R44 V31 R33
BS02 CIE B F23 I25 F61 H199 F12 I14 F50 H188
BS03 IJC B G78 S142 G146 R150 A209 A210 F257 W296 G67 S131 G135 R139 A198 A199 F246 W285
BS04 CA B A209 A210 G212 V213 A234 T235 A198 A199 G201 V202 A223 T224
Gene Ontology
Molecular Function
GO:0016787 hydrolase activity

View graph for
Molecular Function
External links
PDB RCSB:7yd2, PDBe:7yd2, PDBj:7yd2
PDBsum7yd2
PubMed37468532
UniProtG9I933

[Back to BioLiP]