Structure of PDB 7vqa Chain B

Receptor sequence
>7vqaB (length=205) Species: 188937 (Methanosarcina acetivorans C2A) [Search protein sequence]
PKFKRLPGHIAIIPDGNRRWALDRGLEKHEGYKHGIVPGLELYDICVKIG
IGEVTFFGFTQDNTKRPQIQRKAFVDACIKSVKELSKHDAELLVVGNTNS
DMFPKELLAYTKRTKFGKGKVRINFLVNYGWYWDLTYADSKKMIENIASA
EIPRIDLLIRWGGRRRLSGMLPVQTVYSDIYVVDEMWPDFKPEHLFNALE
FYQDQ
3D structure
PDB7vqa Structural insights to a bi-functional isoprenyl diphosphate synthase that can catalyze head-to-tail and head-to-middle condensation.
ChainB
Resolution1.79 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 DMA B D23 G24 N25 R26 R27 Y40 N71 R74 D15 G16 N17 R18 R19 Y32 N63 R66
BS02 DMA B P22 F65 N71 R179 S181 P14 F57 N63 R166 S168
Gene Ontology
Molecular Function
GO:0016740 transferase activity
GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups
GO:0045547 dehydrodolichyl diphosphate synthase activity
GO:0046872 metal ion binding
Biological Process
GO:0016094 polyprenol biosynthetic process

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:7vqa, PDBe:7vqa, PDBj:7vqa
PDBsum7vqa
PubMed35764165
UniProtQ8TPS4

[Back to BioLiP]