Structure of PDB 7vnl Chain B

Receptor sequence
>7vnlB (length=169) Species: 283036 (Sander vitreus) [Search protein sequence]
MFIKPGRCPKPAVQEDFDAARYLGVWYDIQRLPNKAQKGECATATYSLSP
GVGFSVFNRERLANGTIKSVIGSAIAEDPCEPAKLQFFHENAAPVPYWVL
STDYDNYALVYSCINLGASHAAYASIVSRQPTLPEETIKKLQGTMSSFGV
GVDTLLTTNQDAAYCSAMN
3D structure
PDB7vnl Phenylalanine stacking enhances the red fluorescence of biliverdin IX alpha on UV excitation in sandercyanin fluorescent protein.
ChainB
Resolution1.93 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 BLA B D47 A55 Q56 T62 A63 N77 R78 E79 K87 V89 H108 V114 Y142 D28 A36 Q37 T43 A44 N58 R59 E60 K68 V70 H89 V95 Y123
Gene Ontology
Molecular Function
GO:0031409 pigment binding
Biological Process
GO:0000302 response to reactive oxygen species
GO:0006629 lipid metabolic process
GO:0006950 response to stress
Cellular Component
GO:0005737 cytoplasm

View graph for
Molecular Function

View graph for
Biological Process

View graph for
Cellular Component
External links
PDB RCSB:7vnl, PDBe:7vnl, PDBj:7vnl
PDBsum7vnl
PubMed35020202
UniProtA0A1D5B367

[Back to BioLiP]