Structure of PDB 7vbm Chain B

Receptor sequence
>7vbmB (length=82) Species: 10090 (Mus musculus) [Search protein sequence]
KVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDA
VTYTEHAKRKTVTAMDVVYALKRQGRTLYGFG
3D structure
PDB7vbm Unusual nucleosome formation and transcriptome influence by the histone H3mm18 variant.
ChainB
Resolution3.4 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna B T30 P32 R45 T11 P13 R26
BS02 dna B R45 I46 S47 G48 R78 K79 T80 R26 I27 S28 G29 R59 K60 T61
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0005515 protein binding
GO:0030527 structural constituent of chromatin
GO:0046982 protein heterodimerization activity
Biological Process
GO:0006325 chromatin organization
GO:0006334 nucleosome assembly
GO:0061644 protein localization to CENP-A containing chromatin
Cellular Component
GO:0000786 nucleosome
GO:0005634 nucleus
GO:0005654 nucleoplasm
GO:0005694 chromosome
GO:0043505 CENP-A containing nucleosome

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Molecular Function
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Cellular Component
External links
PDB RCSB:7vbm, PDBe:7vbm, PDBj:7vbm
PDBsum7vbm
PubMed34929737
UniProtP62806|H4_MOUSE Histone H4 (Gene Name=H4c1)

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