Structure of PDB 7vaz Chain B

Receptor sequence

>7vazB (length=216) Species: 10090 (Mus musculus)

EVKLLQSGGGLVQPGGSLKLSCAASGIDFSGYWMSWVRRAPGKGLEWIGE
ITPDSSTINYAPSLKDEFIISRDNAKNTLYLQMTKVRSDDTALYYCVSYY
EGFAYWGQGTLVTVSAASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFP
EPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICN
VNHKPSNTKVDKKVEP

3D structure

• PDB: 7vaz Site-specific GalNAc modification on a MUC1 neoantigen epitope forms a basis for high-affinity antibody binding
• Chain: B
• Resolution: 2.73 Å

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	peptide	B	G32 Y33 W34 E51 Y101 E102	G31 Y32 W33 E50 Y100 E101

External links

• PDB: RCSB:7vaz, PDBe:7vaz, PDBj:7vaz
• PDBsum: 7vaz