Structure of PDB 7ub8 Chain B

Receptor sequence
>7ub8B (length=225) Species: 562 (Escherichia coli) [Search protein sequence]
DIAHNLAQVRDKISAAATRCGRSPEEITLLAVSKTAPASAIAEAIDAGQR
QFGENYVQEGVDKIRHFQELGVTGLEWHFIGPLQSNKSRLVAEHFDWCHT
IDRLRIATRLNDQRPAELPPLNVLIQINISDENSASGIQLAELDELAAAV
AELPRLRLRGLMAIPAPESEYVRQFEVARQMAVAFAGLKTRYPHIDTLSL
GMSDDMEAAIAAGSTMVRIGTAIFG
3D structure
PDB7ub8 Characterization of the Escherichia coli pyridoxal 5'-phosphate homeostasis protein (YggS): Role of lysine residues in PLP binding and protein stability.
ChainB
Resolution2.3 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 PLP B V34 K36 N57 I82 M204 R220 G222 T223 V32 K34 N55 I80 M202 R218 G220 T221
Gene Ontology
Molecular Function
GO:0030170 pyridoxal phosphate binding
Cellular Component
GO:0005829 cytosol

View graph for
Molecular Function

View graph for
Cellular Component
External links
PDB RCSB:7ub8, PDBe:7ub8, PDBj:7ub8
PDBsum7ub8
PubMed36218140
UniProtP67080|PLPHP_ECOLI Pyridoxal phosphate homeostasis protein (Gene Name=yggS)

[Back to BioLiP]