Structure of PDB 7u0j Chain B

Receptor sequence
>7u0jB (length=79) Species: 9606 (Homo sapiens) [Search protein sequence]
RDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTY
TEHAKRKTVTAMDVVYALKRQGRTLYGFG
3D structure
PDB7u0j Structural mechanism of LIN28B nucleosome targeting by OCT4.
ChainB
Resolution2.7 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna B T30 P32 R36 R45 T8 P10 R14 R23
BS02 dna B R45 I46 S47 G48 R78 K79 T80 R23 I24 S25 G26 R56 K57 T58
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0003723 RNA binding
GO:0005515 protein binding
GO:0030527 structural constituent of chromatin
GO:0046982 protein heterodimerization activity
Biological Process
GO:0006325 chromatin organization
GO:0006334 nucleosome assembly
GO:0032200 telomere organization
GO:0045653 negative regulation of megakaryocyte differentiation
GO:0061644 protein localization to CENP-A containing chromatin
Cellular Component
GO:0000781 chromosome, telomeric region
GO:0000786 nucleosome
GO:0005576 extracellular region
GO:0005634 nucleus
GO:0005654 nucleoplasm
GO:0005694 chromosome
GO:0016020 membrane
GO:0032991 protein-containing complex
GO:0043505 CENP-A containing nucleosome
GO:0070062 extracellular exosome

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Cellular Component
External links
PDB RCSB:7u0j, PDBe:7u0j, PDBj:7u0j
PDBsum7u0j
PubMed37327775
UniProtP62805|H4_HUMAN Histone H4 (Gene Name=H4C1)

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