Structure of PDB 7t1q Chain B

Receptor sequence
>7t1qB (length=375) Species: 400667 (Acinetobacter baumannii ATCC 17978) [Search protein sequence]
SDTLSLSLELLQQPSVTPIDHTCQTIMADRLAKVGFHIEPMRFGDVDNLW
ARRGTEGPVFCFAGHTDVVPTGRLDAWNSDPFAPEIRDGKLYGRGSADMK
TALAAMVVASERFVAKHPNHKGSIAFLITSDEEGPAVNGTVKVIETLEKR
NEKITWCLVGEPSSTHKLGDIVKNGRRGSLNAVLKVQGKQGHVAYPHLAR
NPIHEASPALAELCQTVWDNGNEYFPATSFQISNIHAGTGATNVIPGALE
VTFNFRYSTEVTAEQLKQRVHEILDKHGLQYEIVWNLSGLPFLTPVGELV
NAAQTAILNVTGTETELSTSGGTSDGRFIAPTGAQVLELGVLNATIHQIN
EHVDVHDLDPLTDIYEQILENLLAQ
3D structure
PDB7t1q Crystal Structure of the Succinyl-diaminopimelate Desuccinylase (DapE) from Acinetobacter baumannii in complex with Succinic Acid.
ChainB
Resolution2.25 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.5.1.18: succinyl-diaminopimelate desuccinylase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ZN B H68 D101 E164 H65 D98 E161
BS02 ZN B D101 E136 H350 D98 E133 H347
Gene Ontology
Molecular Function
GO:0008270 zinc ion binding
GO:0009014 succinyl-diaminopimelate desuccinylase activity
GO:0016787 hydrolase activity
GO:0046872 metal ion binding
GO:0050897 cobalt ion binding
Biological Process
GO:0009085 lysine biosynthetic process
GO:0009089 lysine biosynthetic process via diaminopimelate
GO:0019877 diaminopimelate biosynthetic process

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Molecular Function
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Biological Process
External links
PDB RCSB:7t1q, PDBe:7t1q, PDBj:7t1q
PDBsum7t1q
PubMed
UniProtA3M8H2|DAPE_ACIBT Succinyl-diaminopimelate desuccinylase (Gene Name=dapE)

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