Structure of PDB 7slq Chain B

Receptor sequence

>7slqB (length=321) Species: 9606 (Homo sapiens) [Search protein sequence]

SRVKQVLADIAKQVDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFN
KMKKLTTDGKLIARALRSSAVVELDLEGTRIRRKKPLGERPKDEDERTVY
VELLPKNVNHSWIERVFGKCGNVVYISIPHYKSTGDPKGFAFVEFETKEQ
AAKAIEFLLRVLSKSEWMDLKKEYLALQKASMASLKKTISQIKSESTGPQ
FVSGVIVKIISTEPLPGRKQVRDTLAAISEVLYVDLLEGDTECHARFKTP
EDAQAVINAYTEINKKHCWKLEILSGDHEQRYWQKILVDRQAKLNQPREK
KRGTEKLITKAEKIRLAKTQQ

3D structure

PDB

7slq Structural basis of RNA conformational switching in the transcriptional regulator 7SK RNP.

Chain

Resolution

3.7 Å

3D
structure

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Enzymatic activity

Enzyme Commision number

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	B	F44 D54 F56 L57 F77 N78 K79 H138 S155 P157 H158 K160 F168 F170 K381 W384 K388 L392 Q395 K396 M399 R468 L482 Y483 V484 D485 R496 Y532 I536 D539 R540 K543 L544 R548 K550 R552 G553 T554	F16 D26 F28 L29 F49 N50 K51 H110 S127 P129 H130 K132 F140 F142 K164 W167 K171 L175 Q178 K179 M182 R218 L232 Y233 V234 D235 R246 Y282 I286 D289 R290 K293 L294 R298 K300 R302 G303 T304

Gene Ontology

	Molecular Function
GO:0003676	nucleic acid binding
GO:0003723	RNA binding

	Biological Process
GO:0006396	RNA processing

	Cellular Component
GO:0005634	nucleus
GO:1990904	ribonucleoprotein complex

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Molecular Function

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Biological Process

View graph for
Cellular Component

External links

PDB	RCSB:7slq, PDBe:7slq, PDBj:7slq
PDBsum	7slq
PubMed	35320752
UniProt	Q4G0J3\|LARP7_HUMAN La-related protein 7 (Gene Name=LARP7)

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