Structure of PDB 7sbx Chain B

Receptor sequence
>7sbxB (length=1183) Species: 31631 (Human coronavirus OC43) [Search protein sequence]
VIGDLKCPLDSRTGSLNNIPSISTATVDVTNGLGTYYVLDRVYLNTTLFL
NGYYPTSGSTYRNMALKGTDKLSTLWFKPPFLSDFINGIFAKVKNTKVFK
DGVMYSEFPAITIGSTFVNTSYSVVVQPRTINLQGLLEVSVCQYNMCEYP
HTICHPKLGNHFKELWHMDTGVVSCLYKRNFTYDVNATYLYFHFYQEGGT
FYAYFTDTGVVTKFLFNVYLGMALSHYYVMPLTCISRRDIGFTLEYWVTP
LTSRQYLLAFNQDGIIFNAVDCMSDFMSEIKCKTQSIAPPTGVYELNGYT
VQPIADVYRRKPDLPNCNIEAWLNDKSVPSPLNWERKTFSNCNFNMSSLM
SFIQADSFTCNNIDAAKIYGMCFSSITIDKFAIPNGRKVDLQLGNLGYLQ
SFNYRIDTTATSCQLYYNLPAANVSVSRFNPSTWNKRFGFIENSVFKPQP
AGVLTNHDVVYAQHCFKAPKNFCPCKLNSNGIGTCPAGTNYLTCHNLCNP
DPITFTGPYKCPQTKSLVGIGEHCSGLAVKSDYCGGNPCTCQPQAFLGWS
ADSCLQGDKCNIFANLILHDVNSGLTCSTDLQKANTDIKLGVCVNYDLYG
ISGQGIFVEVNATYYNSWQNLLYDSNGNLYGFRDYITNRTFMIRSCYSGR
VSAAFHANSSEPALLFRNIKCNYVFNNSLIRQLQPINYFDSYLGCVVNAY
NSTAISVQTCDLTVGSGYCVDYSKNTGYRFTNFEPFTVNSVNDSLEPVGG
LYEIQIPSEFTIGNMEEFIQTSSPKVTIDCAAFVCGDYAACKSQLVEYGS
FCDNINAILTEVNELLDTTQLQVANSLMNGVTLSTKLKDGVNFNVDDINF
SSVLGCLGASSRSAIEDLLFDKVKLSDVGFVAAYNNCTGGAEIRDLICVQ
SYKGIKVLPPLLSENQISGYTLAATSASLFPPWTAAAGVPFYLNVQYRIN
GLGVTMDVLSQNQKLIANAFNNALDAIQEGFDATNSALVKIQAVVNANAE
ALNNLLQQLSNRFGAISSSLQEILSRLDPPEAEAQIDRLINGRLTALNAY
VSQQLSDSTLVKFSAAQAMEKVNECVKSQSSRINFCGNGNHIISLVQNAP
YGLYFIHFSYVPTKYVTAKVSPGLCIAGDRGIAPKSGYFVNVNNTWMYTG
SGYYYPEPITENNVVVMSTCAVNYTKAPYVMLN
3D structure
PDB7sbx Structural mapping of antibody landscapes to human betacoronavirus spike proteins.
ChainB
Resolution3.0 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 8Z9 B M372 L375 A391 L603 M346 L349 A365 L566
BS02 8Z9 B N421 L422 G423 N395 L396 G397
Gene Ontology
Biological Process
GO:0019062 virion attachment to host cell
GO:0019064 fusion of virus membrane with host plasma membrane
GO:0039654 fusion of virus membrane with host endosome membrane
GO:0046718 symbiont entry into host cell
GO:0046813 receptor-mediated virion attachment to host cell
GO:0075509 endocytosis involved in viral entry into host cell
Cellular Component
GO:0016020 membrane
GO:0019031 viral envelope
GO:0020002 host cell plasma membrane
GO:0044173 host cell endoplasmic reticulum-Golgi intermediate compartment membrane
GO:0055036 virion membrane

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Biological Process
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Cellular Component
External links
PDB RCSB:7sbx, PDBe:7sbx, PDBj:7sbx
PDBsum7sbx
PubMed35507649
UniProtA0A0B4N7I3

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