Structure of PDB 7rxd Chain B

Receptor sequence
>7rxdB (length=439) Species: 1320,158879 [Search protein sequence]
LVIWINGDKGYNGLAEVGKKFKVTVEHPDKLEEKFPQVAPDIIFWAHDRF
GGYAQSGLLAEITPDKAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIY
NKDLLPNPPKTWEEIPALDKELKLMFNLQEPYFTWPLIAADGGYAFKYEN
GKYDIKDVGVDNAGAKAGLTFLVDLIKNKHMNADTDYSIAEAAFNKGETA
MTINGPWAWSNIDTSKVNYGVTVLPTFKGQPSKPFVGVLSAGINAASPNK
ELAKEFLENYLLTDEGLEAVNKDKPLGAVALKSYEEELAKDPRIAATMEN
AQKGEIMPNIPQMSAFWYAVRTAVINAASGRQTVDQALAFAQILIMPNLT
EEQRNGFIQSLKDDPSVSKEILAEAKKLNEHQAPTYKLVINGKTLKGETT
TKAVDAETAEKAFKQYANDNGVDGVWTYDDATKTFTVTE
3D structure
PDB7rxd Cryo-EM structure determination of small proteins by nanobody-binding scaffolds (Legobodies).
ChainB
Resolution3.6 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 GLC B N13 K16 E112 Y156 N6 K9 E94 Y132
BS02 GLC B D66 R67 E154 Y156 R345 D48 R49 E130 Y132 R321
Gene Ontology
Molecular Function
GO:0015144 carbohydrate transmembrane transporter activity
GO:0019865 immunoglobulin binding
Biological Process
GO:0008643 carbohydrate transport
GO:0055085 transmembrane transport
Cellular Component
GO:0005618 cell wall

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:7rxd, PDBe:7rxd, PDBj:7rxd
PDBsum7rxd
PubMed34620716
UniProtP06654;
P99134

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