Structure of PDB 7rga Chain B

Receptor sequence
>7rgaB (length=265) Species: 32630 (synthetic construct) [Search protein sequence]
NPSLIRSESWHVYDGNEANLLDGDDNTGVWYKRSNGEASLAGEFIGLDLG
KEIKLDGIRFVIGKNGGGSSDKWNKFKLEYSLDNESWTTIKEYDKTGAPA
GKDVIEESFETPISAKYIRLTNLEPRHVQLTFSEFAIVSDSQVQLVESGG
GLVQAGGSLRLSCAASRRSSRSWAMAWFRQAPGKEREFVAKISGDGRLTT
YGDSVKGRFTISRDNAEYLVYLQMDSLKPEDTAVYYCAADDNYVTASWRS
GPDYWGQGTQVTVSS
3D structure
PDB7rga Design of a methotrexate-controlled chemical dimerization system and its use in bio-electronic devices.
ChainB
Resolution2.9 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.2.1.35: hyaluronoglucosaminidase.
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 MTX B G97 A98 P99 G97 A98 P99
BS02 MTX B A198 R200 S202 W206 M208 R246 N248 Y251 L252 V253 A165 R167 S169 W173 M175 R213 N215 Y218 L219 V220
External links
PDB RCSB:7rga, PDBe:7rga, PDBj:7rga
PDBsum7rga
PubMed34880210
UniProtP26831|NAGH_CLOPE Hyaluronoglucosaminidase (Gene Name=nagH)

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