Structure of PDB 7r3k Chain B
Receptor sequence
>7r3kB (length=733) Species:
3055
(Chlamydomonas reinhardtii) [
Search protein sequence
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ATKLFPKFSQGLAQDPTTRRIWYGLAMAHDFESHDGMTEENLYQKIFASH
FGQLSIIFLWTSGNLFHVAWQGNFEQWVTDPVHIRPIAHAIWDPHFGQPA
VEAFTRGGASGPVNISTSGVYQWWYTIGMRTNQDLYVGSVFLALVSAIFL
FAGWLHLQPNFQPSLSWFKDAESRLNHHLSGLFGVSSLAWTGHLVHVAIP
ESRGQHVGWDNFLSVLPHPQGLTPFFTGNWAAYAQSPDTASHVFGTAQGS
GQAILTFLGGFHPQTQSLWLTDMAHHHLAIAVIFIVAGHMYRTNFGIGHR
MQAILEAHTPPSGSLGAGHKGLFDTVNNSLHFQLGLALASVGTITSLVAQ
HMYSLPPYAFQAIDFTTQAALYTHHQYIAGFIMCGAFAHGAIFFIRDYDP
EQNKGNVLARMLDHKEALISHLSWVSLFLGFHTLGLYVHNDVMQAFGTPE
KQILIEPVFAQWIQAAHGKALYGFDFLLSSKTSAAFANGQSLWLPGWLDA
INNNQNSLFLTIGPGDFLVHHAIALGLHTTTLILVKGALDARGSKLMPDK
KDFGYSFPCDGPGRGGTCDISAYDAFYLAVFWMLNTIGWVTFYWHWKHLT
LWQGNVAQFDESSTYLMGWLRDYLWLNSSQLINGYNPFGMNSLSVWAWTF
LFGHLIYATGFMFLISWRGYWQELIETLVWAHEKTPLANLVYWKDKPVAL
SIVQARLVGLAHFSVGYIFTYAAFLIASTSGRF
3D structure
PDB
7r3k
Structure of Photosystem I Supercomplex Isolated from a Chlamydomonas reinhardtii Cytochrome b6f Temperature-Sensitive Mutant.
Chain
B
Resolution
2.52 Å
3D
structure
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Enzymatic activity
Enzyme Commision number
1.97.1.12
: photosystem I.
Interaction with ligand
Site
#
Ligand
Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01
CL0
B
L621 W626
L620 W625
BS02
CLA
B
V439 L526 F582 W583 N586 W590 L617
V438 L525 F581 W582 N585 W589 L616
BS03
CLA
B
K685 T686 P687
K684 T685 P686
BS04
CLA
B
S421 S424 W425 L428
S420 S423 W424 L427
BS05
SF4
B
C560 G562 C569 W668
C559 G561 C568 W667
BS06
CLA
B
L679 H683 V692
L678 H682 V691
BS07
CLA
B
S427 L428 G431 F432 I534 F582 W583
S426 L427 G430 F431 I533 F581 W582
BS08
CLA
B
Y438 W590 L617 W620 L625 F651 H655 Y658 Y718 T721 Y722 F725
Y437 W589 L616 W619 L624 F650 H654 Y657 Y717 T720 Y721 F724
BS09
CLA
B
W649 L652 F653 H655 L656 A659
W648 L651 F652 H654 L655 A658
BS10
CLA
B
A659 T660 F662 M663 Y671 W672
A658 T659 F661 M662 Y670 W671
BS11
CLA
B
A29 H30 H35 S50 I57
A28 H29 H34 S49 I56
BS12
CLA
B
H30 F32 I47 S50 H51 Q54 R175 F184 L331 Q334 L335 A338
H29 F31 I46 S49 H50 Q53 R174 F183 L330 Q333 L334 A337
BS13
CLA
B
H30 Q54 I58 W61 F382
H29 Q53 I57 W60 F381
BS14
CLA
B
W61 N65 A89 H90 N115 S117 S119 V646 W647
W60 N64 A88 H89 N114 S116 S118 V645 W646
BS15
CLA
B
I92 W93 D94 H96 F97 N115 V646 W649
I91 W92 D93 H95 F96 N114 V645 W648
BS16
CLA
B
P95 H96
P94 H95
BS17
CLA
B
F48 F52 I149 A153 H157 F162 W168
F47 F51 I148 A152 H156 F161 W167
BS18
CLA
B
W168 H178 T294 N295 F296
W167 H177 T293 N294 F295
BS19
CLA
B
F48 H51 F52 W124 W168 R175 H178 H179 L183 F184
F47 H50 F51 W123 W167 R174 H177 H178 L182 F183
BS20
CLA
B
M130 D135 F142 A190 W191 H194 H197 V198 G209 W210 F213
M129 D134 F141 A189 W190 H193 H196 V197 G208 W209 F212
BS21
CLA
B
L189 A190 T192 H197 L217 P218 G222 L223 F226
L188 A189 T191 H196 L216 P217 G221 L222 F225
BS22
CLA
B
W231 A232 F258 H276 L279 A280 V283 I284 V287 L493
W230 A231 F257 H275 L278 A279 V282 I283 V286 L492
BS23
CLA
B
F258 L269 D273 H276 H277 H352 W494 W498
F257 L268 D272 H275 H276 H351 W493 W497
BS24
CLA
B
S187 S188 W191 H277 H278 I281 I345 P358 Y359
S186 S187 W190 H276 H277 I280 I344 P357 Y358
BS25
CLA
B
L180 F184 A288 M291 Y292 I305
L179 F183 A287 M290 Y291 I304
BS26
CLA
B
H178 S181 H290 T294 F296 I298
H177 S180 H289 T293 F295 I297
BS27
CLA
B
V287 H290 M291 I298 G299 H300
V286 H289 M290 I297 G298 H299
BS28
CLA
B
H300 H309
H299 H308
BS29
CLA
B
L306 H320 V408 M412
L305 H319 V407 M411
BS30
CLA
B
A172 R175 L176 H179 F324 V327 L337 A338 S341 I345
A171 R174 L175 H178 F323 V326 L336 A337 S340 I344
BS31
CLA
B
S347 L348 Q351 M384 F388 L528 T532
S346 L347 Q350 M383 F387 L527 T531
BS32
CLA
B
T344 L348 H352 S355 L356 F510
T343 L347 H351 S354 L355 F509
BS33
CLA
B
W61 T118 S119 A371 T374 H375 Y378 I719 A723
W60 T117 S118 A370 T373 H374 Y377 I718 A722
BS34
CLA
B
W61 T62 W124 T346 V349 M353 Y359 H375 H376 I379
W60 T61 W123 T345 V348 M352 Y358 H374 H375 I378
BS35
CLA
B
A27 H30 D31 L335 F382 G386 H390 I393 Y556 Y574 F577 V716 F720
A26 H29 D30 L334 F381 G385 H389 I392 Y555 Y573 F576 V715 F719
BS36
CLA
B
S315 L316 V408 R411 M412 H415 L419 H422
S314 L315 V407 R410 M411 H414 L418 H421
BS37
CLA
B
H422 W425
H421 W424
BS38
CLA
B
G436 V439 H440 M444 K452 I454
G435 V438 H439 M443 K451 I453
BS39
CLA
B
W463 I464 H468 L478 L479 W494
W462 I463 H467 L477 L478 W493
BS40
CLA
B
L478 A486 N489 W494
L477 A485 N488 W493
BS41
CLA
B
Q351 Y373 A461 I464 Q465 F510 L511 H521 I524 V591 Y594 W595 K598
Q350 Y372 A460 I463 Q464 F509 L510 H520 I523 V590 Y593 W594 K597
BS42
CLA
B
F429 L430 P458 V459 F460 A461 F518 H521 H522
F428 L429 P457 V458 F459 A460 F517 H520 H521
BS43
CLA
B
L423 V426 A525 L528 H529
L422 V425 A524 L527 H528
BS44
CLA
B
W23 V680 H683 Y693 W694 K695 P698
W22 V679 H682 Y692 W693 K694 P697
BS45
CLA
B
F653 I657 F664 V709 H713
F652 I656 F663 V708 H712
BS46
CLA
B
H309 T310 P311 P312 S315
H308 T309 P310 P311 S314
BS47
PQN
B
W23 M663 F664 S667 W668 R669 W672 A700 L701 A706
W22 M662 F663 S666 W667 R668 W671 A699 L700 A705
BS48
CA
B
E202 H207
E201 H206
BS49
CLA
B
F460 W463
F459 W462
BS50
CLA
B
W425 F429 H433
W424 F428 H432
BS51
CLA
B
G64 F67 H68 W71 Q72
G63 F66 H67 W70 Q71
Gene Ontology
Molecular Function
GO:0000287
magnesium ion binding
GO:0009055
electron transfer activity
GO:0016168
chlorophyll binding
GO:0016491
oxidoreductase activity
GO:0046872
metal ion binding
GO:0051539
4 iron, 4 sulfur cluster binding
Biological Process
GO:0015979
photosynthesis
Cellular Component
GO:0009507
chloroplast
GO:0009522
photosystem I
GO:0009535
chloroplast thylakoid membrane
GO:0009579
thylakoid
GO:0016020
membrane
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:7r3k
,
PDBe:7r3k
,
PDBj:7r3k
PDBsum
7r3k
PubMed
36979472
UniProt
P09144
|PSAB_CHLRE Photosystem I P700 chlorophyll a apoprotein A2 (Gene Name=psaB)
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