Structure of PDB 7qys Chain B

Receptor sequence
>7qysB (length=281) Species: 223283 (Pseudomonas syringae pv. tomato str. DC3000) [Search protein sequence]
MKIAVLSRNPRLYSTRRLVEAGIERGHEMVVIDTLRAYMNIASHKPQIHY
RGKPLEGFDAVIPRIGASVTFYGCAVLRQFEMMGVFPLNESVAIARSRDK
LRSLQLLSRRGIGLPVTGFAHSPDDIPDLIQMVNGAPLVIKVLEGTQGIG
VVLCETATAAESVIEAFMGLKQDIMVQEYIKEAGGADIRCFVVGDKVIAS
MKRQAKGSASLIKITPEERMTALRAAKVMGLSVAGVDILRSNHGPLVMEV
NSSPGLEGIEVTTSKDVAGMIIEYLEKNSGP
3D structure
PDB7qys Structural insights into the mechanism of adaptive ribosomal modification by Pseudomonas RimK.
ChainB
Resolution2.9 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 6.3.2.-
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ADP B V139 I180 L250 M259 V139 I180 L239 M248
Gene Ontology
Molecular Function
GO:0003824 catalytic activity
GO:0005524 ATP binding
GO:0016874 ligase activity
GO:0016881 acid-amino acid ligase activity
GO:0018169 ribosomal S6-glutamic acid ligase activity
GO:0046872 metal ion binding
Biological Process
GO:0006412 translation
GO:0009432 SOS response
GO:0018410 C-terminal protein amino acid modification
GO:0036211 protein modification process
Cellular Component
GO:0005737 cytoplasm

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:7qys, PDBe:7qys, PDBj:7qys
PDBsum7qys
PubMed36134899
UniProtQ88AZ9|RIMK_PSESM Probable alpha-L-glutamate ligase (Gene Name=rimK)

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