Structure of PDB 7pd2 Chain B

Receptor sequence
>7pd2B (length=365) Species: 401526 (Thermosinus carboxydivorans Nor1) [Search protein sequence]
GTFYDVIEDYRHFDFAAYFAKVTDSDVRRILRQDRLSALDFLTLLSPQAE
AYLEEMAQKAHRLTVQHFGRTMLLYTPLYLANYCVNQCVYCGFQLKNKLE
RKKLTLAEVEQEAQLIAATGLKHILILTGESRQHSPVSYIKDCVNILKKY
FSSISIEIYPLTQEEYAELIGAGVDGLTIYQEVYNEEVYAEMHPAGPKRN
YRFRLEAPERACQAGMRTVNIGALLGLNDWRQEAFFTGLHADYLQRRFPD
VEVSISPPRMRPHLGGFPPRVVVSDQNLVQYVLAFRLFMPRSGITLSTRE
NGRLRDAMVRLGVTKMSAGSCTAVGGRSDQEAVGQFQISDERTVAEVAAM
LYAQGYQPVYKDWQA
3D structure
PDB7pd2 L-tyrosine-bound ThiH structure reveals C-C bond break differences within radical SAM aromatic amino acid lyases.
ChainB
Resolution1.99 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 SF4 B C85 N87 C89 C92 F94 Q95 K199 Q336 C84 N86 C88 C91 F93 Q94 K198 Q335
BS02 MET B T129 E158 I159 R205 T128 E157 I158 R204
Gene Ontology
Molecular Function
GO:0003824 catalytic activity
GO:0005506 iron ion binding
GO:0046872 metal ion binding
GO:0051536 iron-sulfur cluster binding
GO:0051539 4 iron, 4 sulfur cluster binding
Biological Process
GO:0009228 thiamine biosynthetic process
GO:0042364 water-soluble vitamin biosynthetic process
GO:0044272 sulfur compound biosynthetic process

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:7pd2, PDBe:7pd2, PDBj:7pd2
PDBsum7pd2
PubMed35477710
UniProtA1HPQ5

[Back to BioLiP]