Structure of PDB 7oqy Chain B

Receptor sequence
>7oqyB (length=1105) Species: 330779 (Sulfolobus acidocaldarius DSM 639) [Search protein sequence]
MLDTESRWAIAESFFKTRGLVRQHLDSFNDFLRNKLQQVIYEQGEIVTEV
PGLKIKLGKIRYEKPSIRETDKGPMREITPMEARLRNLTYSSPIFLSMIP
VENNIEGEPIEIYIGDLPIMLKSVADPTSNLPIDKLIEIGEDPKDPGGYF
IVNGSEKVIIAQEDLATNRVLVDYGKSGSNITHVAKVTSSAAGYRVQVMI
ERLKDSTIQISFATVPGRIPFAIIMRALGFVTDRDIVYAVSLDPQIQNEL
LPSLEQASSITSAEEALDFIGNRVAIGQKRENRIQKAEQVIDKYFLPHLG
TSPEDRKKKGYYLASAVNKILELYLGRREPDDKDHYANKRVRLAGDLFTS
LFRVAFKAFVKDLVYQLEKSKVRGRRLSLTALVRADIITERIRHALATGN
WVGGRTGVSQLLDRTNWLSMLSHLRRVVSSLAPNFEARDLHGTQWGRMCP
FETPEGPNSGLVKNLALLAQVSVGINESVVERVAYELGVVSVEDVIRRIS
EQNEDVEKYMSWSKVYLNGRLLGYYEDGKELAKKIRESRRQGKLSDEVNV
AYIATDYLNEVHINCDAGRVRRPLIIVNNGTPLVDTEDIKKLKNGEITFD
DLVKQGKIEFIDAEEEENAYVALNPQDLTPDHTHLEIWPSAILGIIASII
PYPEHNQSPRNTYQSAMAKQSLGLYASNYQIRTDTRAHLLHYPQMPLVQT
RMLGVIGYNDRPAGANAILAIMSYTGYNMEDSIIMNKSSIERGMYRSTFF
RLYSTEEVKYPGGQEDKIITPEAGVKGYKGKDYYRLLEDNGVVSPEVEVK
GGDVLIGKVSPPRAKRDTSIVTRHGENGIVDLVLITETLEGNKLVKVRVR
DLRIPEIGDKFATRHGQKGVVGILIDQVDMPYTAKGIVPDIILNPHALPS
RMTIGQIMEAIGGKYAALSGKPVDATPFLETPKLQEMQKEILKLGHLPDS
TEVVYDGRTGQKLKSRILFGIVYYQKLHHMVADKMHARARGPVQILTRQP
TEGRAREGGLRFGEMERDCLIGFGTAMLIKDRLLDNSDKAVVYICDQCGY
VGWYDRSKNRYVCPVHGDKSVLHPVTVSYAFKLLIQELMSMVISPRLILG
EKVNL
3D structure
PDB7oqy Structural basis of RNA polymerase inhibition by viral and host factors.
ChainB
Resolution2.61 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 2.7.7.6: DNA-directed RNA polymerase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ZN B C1060 H1081 C1045 H1066
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0003899 DNA-directed 5'-3' RNA polymerase activity
GO:0008270 zinc ion binding
GO:0016779 nucleotidyltransferase activity
GO:0032549 ribonucleoside binding
GO:0034062 5'-3' RNA polymerase activity
GO:0046872 metal ion binding
Biological Process
GO:0006351 DNA-templated transcription
Cellular Component
GO:0000428 DNA-directed RNA polymerase complex
GO:0005737 cytoplasm

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:7oqy, PDBe:7oqy, PDBj:7oqy
PDBsum7oqy
PubMed34535646
UniProtP11513|RPO2_SULAC DNA-directed RNA polymerase subunit Rpo2 (Gene Name=rpo2)

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