Structure of PDB 7o1v Chain B

Receptor sequence
>7o1vB (length=729) Species: 1111708 (Synechocystis sp. PCC 6803 substr. Kazusa) [Search protein sequence]
TKFPKFSQDLAQDPTTRRIWYGIATAHDFETHDGMTEENLYQKIFASHFG
HIAIIFLWTSGTLFHVAWQGNFEQWIKDPLNIRPIAHAIWDPHFGEGAVN
AFTQAGASNPVNIAYSGVYHWFYTIGMTTNQELYSGAVFLLVLASLFLFA
GWLHLQPKFRPSLAWFKNAESRLNHHLAGLFGVSSLAWAGHLVHVAIPEA
RGQHVGWDNFLSTPPHPAGLMPFFTGNWGVYAADPDTAGHIFGTSEGAGT
AILTFLGGFHPQTESLWLTDIAHHHLAIAVIFIIAGHMYRTNWGIGHSIK
EILNAHKGPLTGAGHTNLYDTINNSLHFQLGLALASLGVITSLVAQHMYS
LPSYAFIAQDHTTQAALYTHHQYIAGFLMVGAFAHGAIFFVRDYDPVANK
DNVLARMLEHKEALISHLSWVSLFLGFHTLGLYVHNDVVVAFGTPEKQIL
IEPVFAQWIQATSGKALYGFDVLLSNPDSIASTTGAAWLPGWLDAINSGT
NSLFLTIGPGDFLVHHAIALGLHTTALILIKGALDARGSKLMPDKKDFGY
SFPCDGPGRGGTCDISAWDAFYLAMFWMLNTLGWLTFYWHWKHLGVWSGN
VAQFNENSTYLMGWFRDYLWANSAQLINGYNPYGVNNLSVWAWMFLFGHL
VWATGFMFLISWRGYWQELIETIVWAHERTPLANLVRWKDKPVALSIVQA
RLVGLAHFTVGYVLTYAAFLIASTAGKFG
3D structure
PDB7o1v Two-Dimensional Electronic Spectroscopy of a Minimal Photosystem I Complex Reveals the Rate of Primary Charge Separation.
ChainB
Resolution4.31 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 1.97.1.12: photosystem I.
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 CLA B F617 W622 F615 W620
BS02 CLA B D439 W579 N582 W586 L613 F617 D437 W577 N580 W584 L611 F615
BS03 CLA B S418 W422 S416 W420
BS04 CLA B S424 L425 G428 F429 I530 W579 S422 L423 G426 F427 I528 W577
BS05 SF4 B C556 C565 W664 C554 C563 W662
BS06 CLA B L648 F649 H651 L652 W654 A655 L646 F647 H649 L650 W652 A653
BS07 CLA B W586 L621 H651 W654 Y714 T717 Y718 F721 W584 L619 H649 W652 Y712 T715 Y716 F719
BS08 CLA B A655 T656 F658 M659 Y667 W668 A653 T654 F656 M657 Y665 W666
BS09 CLA B F8 A28 H29 F6 A26 H27
BS10 CLA B H29 F31 Y43 I46 S49 H50 H53 R174 L328 H329 Q331 L332 A335 L339 H27 F29 Y41 I44 S47 H48 H51 R172 L326 H327 Q329 L330 A333 L337
BS11 CLA B H29 H53 I57 W60 L380 H27 H51 I55 W58 L378
BS12 CLA B G63 F66 H67 W70 Q71 G61 F64 H65 W68 Q69
BS13 CLA B A88 A116 Y117 S118 W643 A86 A114 Y115 S116 W641
BS14 CLA B I91 W92 D93 H95 N114 V642 W645 I89 W90 D91 H93 N112 V640 W643
BS15 CLA B P94 H95 P92 H93
BS16 CLA B F51 A152 H156 F161 W167 F49 A150 H154 F159 W165
BS17 CLA B W167 H177 W295 W165 H175 W293
BS18 CLA B H50 F51 W167 H177 H178 G181 L182 F183 H48 F49 W165 H175 H176 G179 L180 F181
BS19 CLA B M129 E134 G138 A189 W190 H193 V197 W209 F212 M127 E132 G136 A187 W188 H191 V195 W207 F210
BS20 CLA B H196 P217 L222 Y233 H194 P215 L220 Y231
BS21 CLA B W230 T256 H275 L278 W228 T254 H273 L276
BS22 CLA B H275 H276 I280 H349 L353 W490 W494 H273 H274 I278 H347 L351 W488 W492
BS23 CLA B W123 W190 I273 H276 H277 I280 I342 V346 M350 S355 W121 W188 I271 H274 H275 I278 I340 V344 M348 S353
BS24 CLA B L179 A287 Y291 L177 A285 Y289
BS25 CLA B H177 H289 T293 W295 H175 H287 T291 W293
BS26 CLA B M290 G298 H299 M288 G296 H297
BS27 CLA B E303 I304 H308 E301 I302 H306
BS28 CLA B H308 H317 V405 L406 H306 H315 V403 L404
BS29 CLA B R174 L175 H178 Y321 L334 A335 S338 I342 R172 L173 H176 Y319 L332 A333 S336 I340
BS30 CLA B S344 Q348 G378 M381 F385 L524 S342 Q346 G376 M379 F383 L522
BS31 CLA B V341 Q348 H349 S352 F506 V339 Q346 H347 S350 F504
BS32 CLA B W60 H372 Y375 V715 A719 W58 H370 Y373 V713 A717
BS33 CLA B T61 T343 V346 M350 Y356 L369 H372 H373 T59 T341 V344 M348 Y354 L367 H370 H371
BS34 CLA B A26 H29 L336 F379 G383 H387 I390 W570 F573 A24 H27 L334 F377 G381 H385 I388 W568 F571
BS35 CLA B R408 M409 H412 L416 R406 M407 H410 L414
BS36 CLA B H419 W422 H417 W420
BS37 CLA B W422 F426 H430 W420 F424 H428
BS38 CLA B H437 K449 H435 K447
BS39 CLA B I461 W494 I459 W492
BS40 CLA B A483 T486 W490 A481 T484 W488
BS41 CLA B Y351 I461 Q462 I509 H517 I520 L587 Y590 Y349 I459 Q460 I507 H515 I518 L585 Y588
BS42 CLA B F426 P455 F457 F514 H518 F424 P453 F455 F512 H516
BS43 CLA B H419 L420 V423 H525 H417 L418 V421 H523
BS44 CLA B T18 W22 H679 W690 K691 P694 T16 W20 H677 W688 K689 P692
BS45 CLA B F649 T656 F660 V705 H709 F647 T654 F658 V703 H707
BS46 CLA B K309 P311 L312 K307 P309 L310
BS47 PQN B F660 S663 R665 W668 A696 L697 A702 F658 S661 R663 W666 A694 L695 A700
BS48 ECH B F141 L142 F139 L140
Gene Ontology
Molecular Function
GO:0000287 magnesium ion binding
GO:0009055 electron transfer activity
GO:0016168 chlorophyll binding
GO:0016491 oxidoreductase activity
GO:0046872 metal ion binding
GO:0051539 4 iron, 4 sulfur cluster binding
Biological Process
GO:0015979 photosynthesis
Cellular Component
GO:0005886 plasma membrane
GO:0009522 photosystem I
GO:0009579 thylakoid
GO:0016020 membrane
GO:0031676 plasma membrane-derived thylakoid membrane
GO:0042651 thylakoid membrane

View graph for
Molecular Function

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Biological Process

View graph for
Cellular Component
External links
PDB RCSB:7o1v, PDBe:7o1v, PDBj:7o1v
PDBsum7o1v
PubMed34472838
UniProtP29255|PSAB_SYNY3 Photosystem I P700 chlorophyll a apoprotein A2 (Gene Name=psaB)

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