Structure of PDB 7mdh Chain B

Receptor sequence
>7mdhB (length=360) Species: 4558 (Sorghum bicolor) [Search protein sequence]
RKDCFGVFCTTYDLKSWKKLVNIAVSGAAGMISNHLLFKLASGEVFGQDQ
PIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIGIDPYEVFEDVDWA
LLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVGNPCN
TNALICLKNAPDIPAKNFHALTRLDENRAKCQLALKAGVFYDKVSNVTIW
GNHSTTQVPDFLNAKIDGRPVKEVIKRTKWLEEEFTITVQKRGGALIQKW
GRSSAASTAVSIADAIKSLVTPTPEGDWFSTGVYTTGNPYGIAEDIVFSM
PCRSKGDGDYELATDVSNDDFLWERIKKSEAELLAEKKCVAHLTGEGNAY
CDVPEDTMLP
3D structure
PDB7mdh Structural basis for light activation of a chloroplast enzyme: the structure of sorghum NADP-malate dehydrogenase in its oxidized form.
ChainB
Resolution2.4 Å
3D
structure
Catalytic site residues are labeled in the structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Catalytic site (original residue number in PDB) D201 H229
Catalytic site (residue number reindexed from 1) D175 H203
Enzyme Commision number 1.1.1.82: malate dehydrogenase (NADP(+)).
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ZN B D201 H229 D175 H203
BS02 ZN B C175 H229 C149 H203
Gene Ontology
Molecular Function
GO:0003824 catalytic activity
GO:0016491 oxidoreductase activity
GO:0016615 malate dehydrogenase activity
GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0046554 L-malate dehydrogenase (NADP+) activity
Biological Process
GO:0006108 malate metabolic process

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:7mdh, PDBe:7mdh, PDBj:7mdh
PDBsum7mdh
PubMed10194350
UniProtP17606|MDHP1_SORBI Malate dehydrogenase [NADP] 1, chloroplastic

[Back to BioLiP]