Structure of PDB 7lvl Chain B

Receptor sequence
>7lvlB (length=296) Species: 556287 (Candidatus Liberibacter solanacearum) [Search protein sequence]
MFQRSIPALITPFTKDNLIDEDSFVDHIEWQISEGSSGLVPAGTTGESST
LSYEEHCRVVELCVKTAAGRVPVMAGAGSNNTKESIELAQYAQNTGADAL
LVVVPYYNKPNKKGLLAHFGSIANAVSLPIYIYNNPSRTVIEMDVDTMAE
LVKTYSNIVGVKDATGRIELASGQRIACGSDFIQLSGDDSSALGFNVHGG
VGCISVTANVAPRICAEFQKAISEGDYRQALEYQDKLFPLHQALFIEPSI
SSVKYALSRLGRNVSLVVRAPMVSILEKETMFAIDQALDHIGLCAG
3D structure
PDB7lvl Dihydrodipicolinate synthase bound with allosteric inhibitor (S)-lysine from Candidatus Liberibacter solanacearum
ChainB
Resolution2.01 Å
3D
structure
Catalytic site residues are labeled in the structure
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Enzymatic activity
Catalytic site (original residue number in PDB) T44 Y107 Y133 R138 K162 I204
Catalytic site (residue number reindexed from 1) T44 Y107 Y133 R138 K162 I204
Enzyme Commision number 4.3.3.7: 4-hydroxy-tetrahydrodipicolinate synthase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 LYS B N80 E84 N80 E84
BS02 LYS B S49 Y106 S49 Y106
Gene Ontology
Molecular Function
GO:0008840 4-hydroxy-tetrahydrodipicolinate synthase activity
GO:0016829 lyase activity
Biological Process
GO:0009085 lysine biosynthetic process
GO:0009089 lysine biosynthetic process via diaminopimelate
GO:0019877 diaminopimelate biosynthetic process
GO:0044281 small molecule metabolic process
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:7lvl, PDBe:7lvl, PDBj:7lvl
PDBsum7lvl
PubMed
UniProtA0A0F4VK59

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