Structure of PDB 7lrf Chain B

Receptor sequence
>7lrfB (length=411) Species: 9031 (Gallus gallus) [Search protein sequence]
PDPCYDEHGLPRRCIPDFVNSAFGKEVKVSSTCGKPPSRYCVVTEKGEEQ
VRSCHLCNASDPKRAHPPSFLTDLNNPHNLTCWQSDSYVQYPHNVTLTLS
LGKKFEVTYVSLQFCSPRPESMAIYKSMDYGKTWVPFQFYSTQCRKMYNK
PSRAAITKQNEQEAICTDSHTDVRPLSGGLIAFSTLDGRPTAHDFDNSPV
LQDWVTATDIKVTFSRLHTFGDEARDSYFYAVSDLQVGGRCKCNGHASRC
VRDRDDNLVCDCKHNTAGPECDRCKPFHYDRPWQRATAREANECVACNCN
LHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGFYRDLSKP
ISHRKACKECDCHPVGAAGQTCNQTTGQCPCKDGVTGITCNRCAKGYQQS
RSPIAPCIKIP
3D structure
PDB7lrf The dynamic nature of netrin-1 and the structural basis for glycosaminoglycan fragment-induced filament formation.
ChainB
Resolution3.21 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 GU4 B R447 S448 I450 R401 S402 I404
BS02 GU4 B R350 R374 R400 R304 R328 R354
BS03 CA B F109 D112 N114 T120 S279 F70 D73 N75 T81 S233
External links
PDB RCSB:7lrf, PDBe:7lrf, PDBj:7lrf
PDBsum7lrf
PubMed36869049
UniProtQ90922|NET1_CHICK Netrin-1 (Gene Name=NTN1)

[Back to BioLiP]